Factsheet for TraesCS2D01G026900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plasma membrane 4
extracellular 5
endoplasmic reticulum 4
vacuole 4
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	nucleus, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G035900.1	Wheat	extracellular, golgi	93.61	93.24
TraesCS2B01G037400.1	Wheat	nucleus	93.61	93.24
TraesCS2B01G037200.1	Wheat	plastid	56.29	90.68
TraesCSU01G233300.1	Wheat	extracellular, golgi	55.69	85.32
TraesCS3D01G364700.2	Wheat	extracellular, vacuole	81.44	80.79
TraesCS2D01G026300.1	Wheat	cytosol	80.04	79.56
TraesCS2D01G027200.1	Wheat	cytosol	80.04	75.8
HORVU2Hr1G004030.1	Barley	cytosol	21.96	75.34
TraesCS2D01G062200.1	Wheat	cytosol	44.71	71.79
Os04t0184100-01	Rice	extracellular	71.26	70.83
Zm00001d004288_P001	Maize	extracellular	26.55	68.91
Os04t0183500-01	Rice	extracellular, plasma membrane	68.86	68.59
Os04t0182875-00	Rice	extracellular	25.75	67.54
Os04t0184500-00	Rice	cytosol, plastid	23.95	67.04
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	67.07	66.01
CDY28936	Canola	plastid	49.7	63.2
PGSC0003DMT400004114	Potato	plastid	17.76	60.54
Bra011569.1-P	Field mustard	cytosol	43.51	59.89
CDY51679	Canola	endoplasmic reticulum, vacuole	54.49	58.21
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	57.29	57.75
VIT_03s0038g02030.t01	Wine grape	mitochondrion	53.69	57.73
VIT_03s0038g02040.t01	Wine grape	extracellular	58.48	57.0
TraesCS1D01G425500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.69	54.93
KRH42701	Soybean	cytosol	53.69	54.9
CDX69095	Canola	cytosol	42.71	54.73
PGSC0003DMT400005106	Potato	extracellular	46.11	54.48
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	50.9	53.8
Solyc01g111220.2.1	Tomato	extracellular	54.49	53.32
Solyc11g071550.1.1	Tomato	extracellular, nucleus	53.69	53.16
PGSC0003DMT400048145	Potato	extracellular	53.29	52.87
AT4G34880.2	Thale cress	vacuole	53.69	52.54
VIT_03s0038g01970.t01	Wine grape	cytosol	21.56	52.17
KRH58810	Soybean	nucleus	53.89	52.12
CDX75470	Canola	plastid	30.54	50.33
PGSC0003DMT400004112	Potato	extracellular	54.49	50.18
KRH42703	Soybean	cytosol, extracellular	8.98	50.0
KRH42704	Soybean	cytosol	20.76	49.52
CDX75471	Canola	cytosol	17.76	44.95
VIT_03s0038g02020.t01	Wine grape	mitochondrion	20.76	40.47
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	57.09	40.28
Os01t0115200-00	Rice	mitochondrion, plastid	12.18	39.1
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	44.91	37.69
VIT_03s0038g02000.t01	Wine grape	plasma membrane	55.89	27.29

Protein Annotations

EnsemblPlants:TraesCS2D01G026900.1	EnsemblPlantsGene:TraesCS2D01G026900	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF75304	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:11312696..11314682

Molecular Weight (calculated)

53819.0 Da

IEP (calculated)

9.729

GRAVY (calculated)

-0.019

Length

501 amino acids

Sequence
(BLAST)

001: MAWLRLQAVA AVLALLAAAG VTHSFEFHEA TVDAIQLGFR NGSLTSAALV RFYLDQIRRM NPLLHAVIEV NPDALRQAAR ADAERRRGMA TGALHGVPVL
101: LKDNIATCDA LNTTAGSLAL LGSVVKRDAG VAARLRRAGA VVLGKASLSE WANFRNVHNG WSARGGQTRN PYVLSSDPCG SSSGSGVAAA ANMAAVTLGT
201: ETDGSILCPS SFNSVVGIKP TVGLTSRAGV VPITPRQDSV GPMCRTVSDA VHVLDAIVGY DKLDAAATRT ASKYIPRGGY LQFLKKDGLK GKRIGVPNEF
301: FQGVGEKQMR VYKQHLATIR KHGAVVIENL DIATGRQDIV SNEWTAMLTE FKLSINEYLA DLSYSPVHSL AGIIAFNKAH PIEERLKDFG QQNLILAQNT
401: NGIGHVERAW IRLLKKLSAN GLEKMMKEQQ LDAIVAPEHY ASNHLAIGGH PGIVVPAGYN EKGVPFGICF GGLQGYEPRL IEMAYAFEQA TEVRRPPMFK
501: P

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.