Factsheet for TraesCSU01G233300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plasma membrane 5
extracellular 6
endoplasmic reticulum 5
vacuole 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0184500-00	Rice	cytosol, plastid	36.7	67.04
Os04t0182875-00	Rice	extracellular	37.61	64.4
Zm00001d004288_P001	Maize	extracellular	37.92	64.25
PGSC0003DMT400004114	Potato	plastid	26.3	58.5
TraesCS2D01G026900.1	Wheat	extracellular, golgi	85.32	55.69
TraesCS2B01G037400.1	Wheat	nucleus	84.71	55.07
TraesCS2B01G035900.1	Wheat	extracellular, golgi	84.4	54.87
Bra011569.1-P	Field mustard	cytosol	55.35	49.73
CDX75470	Canola	plastid	46.18	49.67
Os04t0184100-01	Rice	extracellular	72.17	46.83
Os04t0183500-01	Rice	extracellular, plasma membrane	70.64	45.92
TraesCSU01G008400.1	Wheat	extracellular, golgi	66.36	42.72
KRH42704	Soybean	cytosol	26.3	40.95
CDY28936	Canola	plastid	49.24	40.86
Os01t0115200-00	Rice	mitochondrion, plastid	19.27	40.38
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	60.86	40.04
CDY51679	Canola	endoplasmic reticulum, vacuole	56.57	39.45
VIT_03s0038g02040.t01	Wine grape	extracellular	60.55	38.52
PGSC0003DMT400005106	Potato	extracellular	49.85	38.44
VIT_03s0038g02030.t01	Wine grape	mitochondrion	54.74	38.41
Solyc01g111220.2.1	Tomato	extracellular	59.33	37.89
AT4G34880.2	Thale cress	vacuole	58.1	37.11
KRH42701	Soybean	cytosol	55.05	36.73
Solyc11g071550.1.1	Tomato	extracellular, nucleus	55.35	35.77
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	51.38	35.44
PGSC0003DMT400004112	Potato	extracellular	58.72	35.29
VIT_03s0038g01970.t01	Wine grape	cytosol	22.32	35.27
PGSC0003DMT400048145	Potato	extracellular	54.13	35.05
KRH58810	Soybean	nucleus	55.35	34.94
TraesCS2B01G037200.1	Wheat	plastid	32.42	34.08
CDX69095	Canola	cytosol	39.45	32.99
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	59.33	27.32
VIT_03s0038g02020.t01	Wine grape	mitochondrion	19.27	24.51
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	42.2	23.12
TraesCSU01G211000.1	Wheat	cytosol	17.74	21.48
VIT_03s0038g02000.t01	Wine grape	plasma membrane	57.49	18.32
HORVU2Hr1G004030.1	Barley	cytosol	7.65	17.12
KRH42703	Soybean	cytosol, extracellular	1.22	4.44
CDX75471	Canola	cytosol	2.45	4.04

Protein Annotations

EnsemblPlants:TraesCSU01G233300.1	EnsemblPlantsGene:TraesCSU01G233300	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF75304
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:345396071..345397273

Molecular Weight (calculated)

34885.2 Da

IEP (calculated)

10.739

GRAVY (calculated)

-0.005

Length

327 amino acids

Sequence
(BLAST)

001: MAWLRLLATI LALLATAGVA HSFEFHEDTV DAIQLGFRNG SLTSAALVRF YLDQIRRLKP LLHAVIEVNP DALRQAKRAD AERRRGTATG PLHGVPVLLK
101: DNIATRDALN TTAGSLALLG SVVKRDAGVA ARLRRAGAVV LGKASLSEWA NFRNVRNGWS ARGGQTRNPY VLSSDPCGSS SGSGVAAAAN MAAVTLGTET
201: DGSILCPSSF NSVVGIKPTL GLTSRAGVVP ITTRQDSVGP MCRTVSDAVH VLDAIVGYDK LDAAATRAAS KYIPYGGYLQ FLKKDGLRGK RIGVPNVLFQ
301: QGLGEKQMRV YEQQLGRMRL LSYFKSP

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.