CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, plasma membrane

Predictor Summary:

plasma membrane 6
extracellular 6
endoplasmic reticulum 5
vacuole 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004287_P001	Maize	cytosol	54.39	88.85
KXG36216	Sorghum	cytosol	66.86	69.43
EES10484	Sorghum	golgi, vacuole	66.47	69.03
EER99375	Sorghum	extracellular	67.06	67.45
EER97209	Sorghum	extracellular	66.86	67.25
CDY28936	Canola	plastid	49.12	63.96
Bra011569.1-P	Field mustard	cytosol	43.47	61.26
PGSC0003DMT400004114	Potato	plastid	17.54	61.22
VIT_03s0038g02040.t01	Wine grape	extracellular	60.43	60.31
VIT_03s0038g02030.t01	Wine grape	mitochondrion	53.8	59.23
CDY51679	Canola	endoplasmic reticulum, vacuole	53.8	58.85
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	56.92	58.75
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	53.8	58.23
CDX69095	Canola	cytosol	43.66	57.29
Solyc01g111220.2.1	Tomato	extracellular	56.53	56.64
AT4G34880.2	Thale cress	vacuole	56.14	56.25
PGSC0003DMT400005106	Potato	extracellular	46.39	56.13
Solyc11g071550.1.1	Tomato	extracellular, nucleus	54.97	55.73
KRH42701	Soybean	cytosol	52.24	54.69
PGSC0003DMT400048145	Potato	extracellular	53.8	54.65
KXG38675	Sorghum	endoplasmic reticulum, vacuole	57.7	54.51
KRH42703	Soybean	cytosol, extracellular	9.55	54.44
PGSC0003DMT400004112	Potato	extracellular	57.5	54.23
KRH58810	Soybean	nucleus	53.22	52.7
CDX75471	Canola	cytosol	19.69	51.01
VIT_03s0038g01970.t01	Wine grape	cytosol	20.47	50.72
CDX75470	Canola	plastid	30.02	50.66
KRH42704	Soybean	cytosol	19.69	48.1
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.61	45.14
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	61.21	44.23
EES11858	Sorghum	extracellular	6.63	42.5
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	45.81	39.36
VIT_03s0038g02000.t01	Wine grape	plasma membrane	56.92	28.46

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	EntrezGene:8083454	InterPro:AS_sf	InterPro:Amidase_dom
UniProt:C5YCU5	EnsemblPlants:EES11861	ProteinID:EES11861	ProteinID:EES11861.1	InterPro:IPR036928	PFAM:PF01425
PANTHER:PTHR42678	PANTHER:PTHR42678:SF9	MetaCyc:PWY-5921	EnsemblPlantsGene:SORBI_3006G027900	SUPFAM:SSF75304	SignalP:SignalP-noTM
UniParc:UPI0001A872FF	RefSeq:XP_002447533.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:5731680..5734946

Molecular Weight (calculated)

53834.6 Da

IEP (calculated)

7.020

GRAVY (calculated)

0.106

Length

513 amino acids

Sequence
(BLAST)

001: MAWLRLLLLA AVLALTAGAG TSRSFEFEEA TLDAIHQGFK NGSLTSTALV QHYLSQISRL NPLLHAVIEV NPDALRQAAQ ADAERRRSSS GDAKIAGGLH
101: GVPVLLKDNI ATRDGLNTTA GSLALLGSVV RRDAGVVARL RRAGAVVLGK ANMDEWANFR SAIGTGGWSP RGGQGKNPYV LSSPPCGSST GPAIAAAANM
201: AAVTLGTETD GSILCPSSLN SVVGIKPTVG LTSRAGVIPI SPRQDTVGPI CRTVADAVHV LDAIVGYDEL DAVATRAASK YIPDGGYTQF LKVDGLEGKR
301: IGVPNVFFDF PDGSVRQKVY HQHLDTLRRN GAVVIESLSI ANLDVILNAT VSGELVALAA EFKIVLNAYL SSDLSRSPVA SLAEIIAFNN AHPDEEMLKQ
401: FGQLIFLVSQ NTSGIGSVEK AAIQQLDELT ANGVEKTMRQ HKLDAIVAPD SSLATVLAIG GLPGIAVPAG YDEQGAPFGI TFGGLKGYEP RLIEIAYAFE
501: QATKARKPPM FKN

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.