CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 5
extracellular 7
endoplasmic reticulum 6
vacuole 5
golgi 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99375	Sorghum	extracellular	87.25	87.25
KXG36216	Sorghum	cytosol	84.31	87.04
Os04t0184500-00	Rice	cytosol, plastid	24.31	69.27
Os04t0184100-01	Rice	extracellular	68.24	69.05
Os04t0183500-01	Rice	extracellular, plasma membrane	66.67	67.59
EES11861	Sorghum	extracellular, golgi, plasma membrane	67.25	66.86
Zm00001d004288_P001	Maize	extracellular	24.51	64.77
Os04t0182875-00	Rice	extracellular	23.73	63.35
CDY28936	Canola	plastid	47.45	61.42
EES10484	Sorghum	golgi, vacuole	59.41	61.34
VIT_03s0038g02030.t01	Wine grape	mitochondrion	53.92	59.01
PGSC0003DMT400004114	Potato	plastid	16.86	58.5
VIT_03s0038g02040.t01	Wine grape	extracellular	58.04	57.59
Bra011569.1-P	Field mustard	cytosol	40.59	56.87
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	54.9	56.34
CDY51679	Canola	endoplasmic reticulum, vacuole	51.57	56.08
PGSC0003DMT400005106	Potato	extracellular	45.69	54.95
CDX69095	Canola	cytosol	41.96	54.73
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	50.78	54.64
KXG38675	Sorghum	endoplasmic reticulum, vacuole	56.86	53.41
KRH42701	Soybean	cytosol	51.18	53.27
PGSC0003DMT400048145	Potato	extracellular	51.96	52.48
Solyc11g071550.1.1	Tomato	extracellular, nucleus	51.76	52.17
AT4G34880.2	Thale cress	vacuole	52.35	52.15
Solyc01g111220.2.1	Tomato	extracellular	52.35	52.15
KRH58810	Soybean	nucleus	51.96	51.16
KRH42703	Soybean	cytosol, extracellular	8.82	50.0
PGSC0003DMT400004112	Potato	extracellular	52.75	49.45
VIT_03s0038g01970.t01	Wine grape	cytosol	19.8	48.79
CDX75471	Canola	cytosol	18.43	47.47
KRH42704	Soybean	cytosol	19.41	47.14
CDX75470	Canola	plastid	28.04	47.04
EES11858	Sorghum	extracellular	7.06	45.0
VIT_03s0038g02020.t01	Wine grape	mitochondrion	21.37	42.41
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	55.69	40.0
Os01t0115200-00	Rice	mitochondrion, plastid	11.96	39.1
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	43.92	37.52
VIT_03s0038g02000.t01	Wine grape	plasma membrane	56.27	27.97

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	EntrezGene:8080678	InterPro:AS_sf	InterPro:Amidase_dom
UniProt:C5X8J1	EnsemblPlants:EER97209	ProteinID:EER97209	ProteinID:EER97209.1	InterPro:IPR036928	PFAM:PF01425
PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	MetaCyc:PWY-5921	EnsemblPlantsGene:SORBI_3002G301700	SUPFAM:SSF75304	unigene:Sbi.11032
SignalP:SignalP-noTM	UniParc:UPI0001A83B33	RefSeq:XP_002460688.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:67820267..67822736

Molecular Weight (calculated)

54343.4 Da

IEP (calculated)

7.013

GRAVY (calculated)

0.061

Length

510 amino acids

Sequence
(BLAST)

001: MVDLRLQVVA TVLGMVALAA AAGGSSSSGK QSEFQEVTVD AIHQGFKNGS LTSTALVRFY LDQIARLNPL LHAVIEVNPD ALAQAARADA ERSASRGRCA
101: VGLHGIPVLL KDNIATRDRL NTTAGSLALL GSVVRRDAGV VARLRRAGAV ILGKANPSEW SNFRPVESGW SARGGQTLNP YVLSATPCGS SAGPGVAAAA
201: NMAAVTLGSE TDGSILCPSS FNSVVGIKPT VGLTSRSGVI PITPLQDTIG PMCRTVSDAV HVLDVIVGYD ELDAEATGAA SKYIPHGGYT QFLRIHGLKG
301: KRIGVLDVLF QGYDDMQLAV YEKHLDTMRQ QGAVLIKDLD LATNFTDLGE QEILLMNAEF KLSINAYLSD LLYSPVRSLA QIIAFNEAHP VEERLKDFGQ
401: PNLIAAEETN GIGTRERAAI QRLKEISTNG LEKLMKEHQL DAIVGANFLS FRVLAIGGYP GIAVPAGYDK EGVPFAIYFG GLKGYEPRLI EIAYAFEQAT
501: KVRRPPSFKS

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.