CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plasma membrane 5
extracellular 5
endoplasmic reticulum 5
vacuole 6
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0182900-00	Rice	plastid	46.15	72.84
EES11861	Sorghum	extracellular, golgi, plasma membrane	69.03	66.47
KXG36216	Sorghum	cytosol	61.54	61.54
EER99375	Sorghum	extracellular	62.55	60.59
EER97209	Sorghum	extracellular	61.34	59.41
CDY28936	Canola	plastid	45.34	56.85
PGSC0003DMT400004114	Potato	plastid	16.6	55.78
Bra011569.1-P	Field mustard	cytosol	39.88	54.12
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	53.04	52.72
CDY51679	Canola	endoplasmic reticulum, vacuole	50.0	52.67
CDX69095	Canola	cytosol	41.3	52.17
VIT_03s0038g02030.t01	Wine grape	mitochondrion	48.79	51.72
VIT_03s0038g02040.t01	Wine grape	extracellular	53.44	51.36
Solyc11g071550.1.1	Tomato	extracellular, nucleus	52.43	51.19
PGSC0003DMT400005106	Potato	extracellular	43.52	50.71
AT4G34880.2	Thale cress	vacuole	52.23	50.39
PGSC0003DMT400048145	Potato	extracellular	51.42	50.3
Solyc01g111220.2.1	Tomato	extracellular	51.82	50.0
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	47.57	49.58
KRH42701	Soybean	cytosol	48.58	48.98
KXG38675	Sorghum	endoplasmic reticulum, vacuole	53.44	48.62
PGSC0003DMT400004112	Potato	extracellular	53.04	48.16
KRH42703	Soybean	cytosol, extracellular	8.7	47.78
KRH58810	Soybean	nucleus	49.19	46.91
VIT_03s0038g01970.t01	Wine grape	cytosol	19.64	46.86
CDX75471	Canola	cytosol	18.62	46.46
CDX75470	Canola	plastid	27.73	45.07
KRH42704	Soybean	cytosol	18.83	44.29
EES11858	Sorghum	extracellular	6.88	42.5
VIT_03s0038g02020.t01	Wine grape	mitochondrion	19.84	38.13
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	54.05	37.61
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	42.31	35.01
VIT_03s0038g02000.t01	Wine grape	plasma membrane	51.21	24.66

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:3.90.1300.10	MapMan:35.1	EntrezGene:8083455	InterPro:AS_sf	InterPro:Amidase_dom
UniProt:C5YCU6	EnsemblPlants:EES10484	ProteinID:EES10484	ProteinID:EES10484.1	InterPro:IPR036928	PFAM:PF01425
PANTHER:PTHR42678	MetaCyc:PWY-5921	EnsemblPlantsGene:SORBI_3006G028000	SUPFAM:SSF75304	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0001A86AF7	RefSeq:XP_002446156.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:5762025..5765519

Molecular Weight (calculated)

52735.3 Da

IEP (calculated)

6.067

GRAVY (calculated)

0.044

Length

494 amino acids

Sequence
(BLAST)

001: MAWQRLLLLA AAVALTVTAG GAAFQFEEAT LESIQQGFKN GSLNSTALVR YYLDQIARLN PKLHAVIEVN PDALGDAARA DAERASSSGG RGLLHGVPVL
101: VKDLIATRDR LNTTAGSFAL LGSVAGRDAG AIVLGKSNLP EWGNMRSAMG LHGWSARGGQ AMNPYVLKMD PCEASTGSAI AAAANMAAVT LGTETIASIL
201: CPASANAVVG IKPTVGLTSR SGVIPFTLRQ DTVGPLCRTV ADAVHVLDAI VGYDDLDAEA TMAASQYIPQ GGYKQFLKID GLRDKRIGIP NGFFHFETKT
301: GLVYKQHIET MRRLGANVIE NLNIENLSVS RNTTTSGFAV AAPAEFKINL NNYLSNLSYT PVRCLADIIA FNIAHPDEEK LIEYDQQLLL LSESTRGIGP
401: LERAAIHRME ELSANGVEKM MKEHCLDAIF TPDSSVATVL AYNGLPGIEV PAGYDENGVP FGVTFGGLRG YEPRLVEMAY AFEQATKVRR PPTI

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.