Factsheet for TraesCS2B01G037100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plasma membrane 4
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G035800.1	Wheat	vacuole	87.8	91.58
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	91.14	90.96
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	90.35	90.18
TraesCS2B01G037500.1	Wheat	cytosol, plastid	63.58	88.49
TraesCS2B01G037800.1	Wheat	extracellular	45.47	78.57
Os04t0183300-01	Rice	cytosol	47.24	75.95
TraesCS2B01G035200.1	Wheat	cytosol	65.75	68.16
TraesCS2B01G037400.1	Wheat	nucleus	66.93	67.59
TraesCS2B01G035900.1	Wheat	extracellular, golgi	65.16	65.81
TraesCS2B01G037200.1	Wheat	plastid	38.78	63.34
Os06t0271300-00	Rice	cytosol, plastid	66.73	63.01
PGSC0003DMT400004114	Potato	plastid	17.91	61.9
CDY28936	Canola	plastid	47.44	61.17
TraesCS2B01G036000.1	Wheat	cytosol	33.07	59.79
TraesCS2B01G036100.1	Wheat	cytosol	23.43	58.91
Bra011569.1-P	Field mustard	cytosol	41.73	58.24
CDY51679	Canola	endoplasmic reticulum, vacuole	53.15	57.57
VIT_03s0038g02030.t01	Wine grape	mitochondrion	52.17	56.87
VIT_03s0038g02040.t01	Wine grape	extracellular	57.48	56.81
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	55.51	56.74
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	57.68	56.67
KRH42701	Soybean	cytosol	53.54	55.51
Solyc01g111220.2.1	Tomato	extracellular	55.91	55.47
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	51.38	55.06
CDX69095	Canola	cytosol	41.73	54.22
AT4G34880.2	Thale cress	vacuole	54.53	54.1
PGSC0003DMT400004112	Potato	extracellular	56.89	53.12
KRH58810	Soybean	nucleus	53.35	52.32
VIT_03s0038g01970.t01	Wine grape	cytosol	21.26	52.17
Solyc11g071550.1.1	Tomato	extracellular, nucleus	51.77	51.98
PGSC0003DMT400048145	Potato	extracellular	51.38	51.68
PGSC0003DMT400005106	Potato	extracellular	43.11	51.65
KRH42704	Soybean	cytosol	20.47	49.52
CDX75470	Canola	plastid	28.74	48.03
CDX75471	Canola	cytosol	17.91	45.96
KRH42703	Soybean	cytosol, extracellular	8.07	45.56
VIT_03s0038g02020.t01	Wine grape	mitochondrion	22.83	45.14
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	60.24	43.1
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	44.09	37.52
VIT_03s0038g02000.t01	Wine grape	plasma membrane	54.92	27.19

Protein Annotations

EnsemblPlants:TraesCS2B01G037100.1	EnsemblPlantsGene:TraesCS2B01G037100	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF75304
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:17447762..17450697

Molecular Weight (calculated)

53932.4 Da

IEP (calculated)

9.578

GRAVY (calculated)

0.095

Length

508 amino acids

Sequence
(BLAST)

001: MPRPLLAVVI VAALVLALAG AHGFRIEEAT VASIQLGFNN GSLTSVDLVR FYLDRISRLN PLLHAVIEVN PDALRQAARA DAERCSVRRS RASGALRGVP
101: VLLKDNIATR DALNTTAGSF ALLGSMVRRD AGVVRRLRRA GAVVLGKANM DEWANFRSFS GGGWSARGGK GRNPYVLSAT PCGSSTGSAI AAAASMAAVT
201: LGTETDGSIL CPASLNSVVG IKPTVGLTSR AGVIPITPRQ DTIGPICRTV ADAVHVLDAI VGYDALDPNP TMEASKYIPR GGYMQFLKKG GLSGKRIGVP
301: SGFFNFPNGT VQQMAYAQHL NTMRKQGAVM IENLDIENLS VLLDSQNNGQ QIALPAEFKL SLNSYLSNLL YSPVRSLAEI IAFNNAHPVE ENMKENGQTV
401: FLVAENTTGI GASEQEAISQ LNKLSANGLK KLMREHELDA IVTPNNAVSS VLAIDGMPAI TVPAGYGKLG VPFGLCFGGL RGYEPRLIEM AYAFEQVTMV
501: RKTPTFLP

Best Arabidopsis Sequence Match ( AT4G34880.2 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA RGLQGKNPYV LSANPSGSSS
201: GSAISVTANL VAVSLGTETD GSILSPASQN SVVGIKPSVG LTSRAGVVPI SLRQDSIGPI CRTVSDAVHL LDAIVGYDPL DEATKTASEF IPEGGYKQFL
301: TTSGLKGKRL GIVMKHSSLL DHHIKTLRRE GAIVINNLTI PNIEVIVGGT DSGEEIALLA EFKMSLNAYL KELVKSPVRS LADVIAYNEE FAEQEKVKEW
401: GQEVFLTAEA TSGMGEKEKT ALQKMKELSR NGIEKLIEEN KLDAIVTLGS DLSSVLAIGG YPGINVPAGY DSGGVPYGIS FGGLRFSEPK LIEIAFAFEQ
501: ATLIRKPPKF IA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.