Factsheet for TraesCS2B01G035800.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plasma membrane 4
extracellular 4
endoplasmic reticulum 4
vacuole 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G037100.1	Wheat	golgi	91.58	87.8
TraesCS2D01G027000.1	Wheat	golgi, plasma membrane, vacuole	86.24	82.51
TraesCS2A01G025000.1	Wheat	golgi, plasma membrane, vacuole	85.83	82.12
TraesCS2B01G037500.1	Wheat	cytosol, plastid	59.14	78.9
Os04t0183300-01	Rice	cytosol	49.49	76.27
TraesCS2B01G037800.1	Wheat	extracellular	40.86	67.69
TraesCS2B01G037200.1	Wheat	plastid	41.27	64.63
TraesCS2B01G035200.1	Wheat	cytosol	64.27	63.88
TraesCS2B01G037400.1	Wheat	nucleus	65.5	63.42
TraesCS2B01G035900.1	Wheat	extracellular, golgi	64.07	62.03
TraesCS2B01G036000.1	Wheat	cytosol	35.11	60.85
TraesCS2B01G036100.1	Wheat	cytosol	24.64	59.41
Os06t0271300-00	Rice	cytosol, plastid	63.45	57.43
CDY28936	Canola	plastid	44.97	55.58
VIT_03s0038g01970.t01	Wine grape	cytosol	22.59	53.14
VIT_03s0038g02030.t01	Wine grape	mitochondrion	50.1	52.36
Bra022128.1-P	Field mustard	endoplasmic reticulum, vacuole	52.98	51.91
TraesCS1B01G448000.1	Wheat	extracellular, vacuole	55.03	51.84
CDY51679	Canola	endoplasmic reticulum, vacuole	49.9	51.81
VIT_03s0038g02040.t01	Wine grape	extracellular	54.62	51.75
Bra011569.1-P	Field mustard	cytosol	38.6	51.65
Solyc01g111220.2.1	Tomato	extracellular	54.21	51.56
KRH42701	Soybean	cytosol	51.33	51.02
VIT_03s0038g02010.t01	Wine grape	extracellular, vacuole	48.46	49.79
CDX69095	Canola	cytosol	39.84	49.62
PGSC0003DMT400005106	Potato	extracellular	43.12	49.53
AT4G34880.2	Thale cress	vacuole	51.75	49.22
PGSC0003DMT400004114	Potato	plastid	14.78	48.98
PGSC0003DMT400004112	Potato	extracellular	54.41	48.71
KRH58810	Soybean	nucleus	51.54	48.46
Solyc11g071550.1.1	Tomato	extracellular, nucleus	50.1	48.22
PGSC0003DMT400048145	Potato	extracellular	49.9	48.12
CDX75471	Canola	cytosol	18.89	46.46
KRH42704	Soybean	cytosol	19.71	45.71
KRH42703	Soybean	cytosol, extracellular	8.42	45.56
CDX75470	Canola	plastid	24.64	39.47
GSMUA_Achr2P11220_001	Banana	endoplasmic reticulum	56.88	39.01
VIT_03s0038g02020.t01	Wine grape	mitochondrion	18.48	35.02
VIT_03s0038g01990.t01	Wine grape	nucleus, peroxisome, plastid	42.3	34.51
VIT_03s0038g02000.t01	Wine grape	plasma membrane	52.36	24.85

Protein Annotations

EnsemblPlants:TraesCS2B01G035800.1	EnsemblPlantsGene:TraesCS2B01G035800	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	PANTHER:PTHR42678	PANTHER:PTHR42678:SF3	PFAM:PF01425	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF75304	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:17153184..17161588

Molecular Weight (calculated)

51421.3 Da

IEP (calculated)

9.277

GRAVY (calculated)

0.111

Length

487 amino acids

Sequence
(BLAST)

001: MPRPLLAVAV AALVLALAGA HGFRIEEASV DSIQLGFNNG SLTSVDLVRF YLDRISRLNR LLHAVIEVNP DALPQAARAD AERCSGRHRR AIGALHGVPV
101: LLKDNIATRD ALNTTAGSFA LLGSVVRRDA GVVRRLRRAG AVVLGKPARQ TWTSGPTSAA SPVAAGAPAA AGAGMAAVTL GTETDGSILC PASLNSVVGI
201: KPTVGLTSRA GVIPITPRQD TVGPICHTVA DAVHVLDAIV GYDARDATPT MEASKYIPHG GYMQFLKKGG LGGKRIGVPS GFFNFPNGTV QQMAYAQHLN
301: TMRKQGAVVI ENLDIENLSV LLDSQNNGQQ IALPAEFKLS LNSYLSNLLY SPVRSLAEII AFNNAHPVEE NMKENGQTVF LVAENTTGIG ASEREAISQL
401: NKLSANGLKK LMREHELDAI VTPNNAVSSV LAIDGMPAIT VPAGYGKLGV PFGLCFGGLR GYEPRLIEMA YAFEQVTMVR KTPTFLP

Best Arabidopsis Sequence Match ( AT4G34880.1 )
(BLAST)

001: MVALRFFFFS SLLILLILSQ ALIMSVGSAS QIRLSSTFSI QEATIEDIRV AFNEKRLTSK QLVELYLEAI SKLNPILHAV IETNPDALIQ AEIADRERDL
101: KNTTKLPILH GVPVLLKDSI STKDKLNTTA GSFALLGSVV ARDAGVVKRL RESGAVILGK ASLSEWAHFR SFSIPDGWSA PSQNSVVGIK PSVGLTSRAG
201: VVPISLRQDS IGPICRTVSD AVHLLDAIVG YDPLDEATKT ASEFIPEGGY KQFLTTSGLK GKRLGIVMKH SSLLDHHIKT LRREGAIVIN NLTIPNIEVI
301: VGGTDSGEEI ALLAEFKMSL NAYLKELVKS PVRSLADVIA YNEEFAEQEK VKEWGQEVFL TAEATSGMGE KEKTALQKMK ELSRNGIEKL IEENKLDAIV
401: TLGSDLSSVL AIGGYPGINV PAGYDSGGVP YGISFGGLRF SEPKLIEIAF AFEQATLIRK PPKFIA

Arabidopsis Description

Amidase family protein [Source:TAIR;Acc:AT4G34880]
SUBAcon: [vacuole,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.