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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
extracellular: 25047395
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G116440.3 Barley mitochondrion 58.6 57.82
Os11t0615900-01 Rice cytosol 3.08 42.86
Os02t0504200-00 Rice cytosol 43.14 42.44
Os12t0209901-01 Rice cytosol, nucleus 14.51 39.57
Os12t0204800-01 Rice cytosol 20.11 39.11
Os12t0204600-01 Rice cytosol, extracellular 16.72 33.12
Os06t0304700-01 Rice cytosol, plasma membrane 14.91 31.82
Os12t0511900-00 Rice cytosol 28.63 31.81
Os12t0511500-01 Rice cytosol 12.54 30.87
Os12t0512400-01 Rice cytosol 10.17 29.93
Os12t0511600-00 Rice cytosol 28.63 29.11
Os12t0209800-01 Rice cytosol, plasma membrane 4.18 28.34
Os12t0511400-02 Rice cytosol 28.0 27.93
Protein Annotations
EntrezGene:107276806Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:B9FES9ProteinID:BAS88867.1
ProteinID:EEE60862.1GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0043531InterPro:IPR032675
InterPro:LRR_dom_sfInterPro:NB-ARCEnsemblPlantsGene:Os04g0378575EnsemblPlants:Os04t0378575-00InterPro:P-loop_NTPasePFAM:PF00931
PRINTS:PR00364PANTHER:PTHR23155PANTHER:PTHR23155:SF873SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI000021CA73
RefSeq:XP_015633643.1SEG:seg::::
Description
Similar to NBS-LRR protein (Fragment). (Os04t0378575-00)
Coordinates
chr4:+:18490353..18494159
Molecular Weight (calculated)
145896.0 Da
IEP (calculated)
7.490
GRAVY (calculated)
-0.169
Length
1268 amino acids
Sequence
(BLAST)
0001: MALAFAGKSV AVSAISMIVR KSFDYLEKYA KAEGMKSVQE RLERTLPQVQ VVFDAIDMER IRDQSEALDA WLWQLRDAVE EAEDVLDEVE YYKLEKKVKT
0101: RGNKVSSSLY KCKRVVVQQF NSTFKAGTFK RLLDAIRKLD EIVVGVERFV LLVDRLDSCT SRHVCHQEVS NPRETSSFSV DEIVIGRDTE RVKIVEWLIE
0201: QDNVHDHDVC AVNAFSIVGI GGMGKTTLAQ AIYNDQRVKQ CFDQAMWICV SNDFDVPALM KKIIQEITRE GTNVTNFNTL QEIVRENLKS KKFLLVFDDV
0301: WNDERRPDWE KLVAPLKFGQ KGSKILLTTR MESVVDIVER VLGGRTKSLR LEGLHDKDLL AIFNRHAFFE VNPDDYFNLQ EIGKKITRKL SGCPLAAKIM
0401: GGLLNNSLDS IYWNRMLREN ISNIEHNSEG IMKILRLSYH HLAPHLQACF RYCGMFREDY WFRKDELINF WMGSGLIQLS ANENQRPEDI GEFYLGILTK
0501: KSFFELQLNK STNLYEGYGE CTNEHYVMHD LLHELARTVS RKECMRISSD EYGSIPRTVR HAAISIVNHV VITDFSSLKN LRTLLISFDK TIHERDQWIV
0601: LKKMLKSATK LRVVHIQNSS LFKLPDKFGN LMHLRYLYHS ESQKKVGKYS FWCPCSIYKL YHLQMIQLNR CLLVSWRLGN LISLRHIYFS GTIYGFSPYI
0701: GHLTSLQDLH EVNVPPKCGF IASELMDLKD LRYLCIRCLE NVNADEATLA KLGEKENLIM LSLTWKNSQQ ESDTEERVLN NLQPHMNLTK LKIKGYNGSR
0801: SPCWLGNTTI INLTYLYISN CSYWQHLPPL GELPSLKYLY LICLNSVKRI DSSFYGCERP FGFPSLEYLF IEHLPALEEW VEMEGEHLFP RLKALVVRHC
0901: KELRNVPTLP STVNYLEMDS VGLTTLHEPY VPNENAEPQK PSLSRLKICH CPYLETLEQL NQFLSLEELH IEHCENLVQL PMDHLQMLSF LKHMTVLGCP
1001: KLMVPPATIR LPLPTKKLHV GSCGTYETCL VNSLCGLTSL TTLMLYGCDI AALPPVEVCK SLIALSCLEI VSCHELADLN GMEELTSLTE LKVIGCNKLE
1101: ELPVVSSQRF QASEHNQVVT ACTSYLRKLK RLQISDPFVL QWAPLRSVTS VTNMTINSCR CLPEEWLMQN CNNLQRIGVR DASHLEFLPS IMASLTSLES
1201: LEFTRVMLIQ SLPELPSSLR RLQILGCNPV LMRRCRKSRG RDWHKIAHIP DLRIVEDIPS SYSWNSYL
Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.