Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0304700-01 | Rice | cytosol, plasma membrane | 29.41 | 9.26 |
| Os12t0511900-00 | Rice | cytosol | 28.34 | 4.65 |
| Os02t0504200-00 | Rice | cytosol | 31.02 | 4.5 |
| Os04t0378575-00 | Rice | extracellular, plasma membrane | 28.34 | 4.18 |
| Os12t0511400-02 | Rice | cytosol | 28.34 | 4.17 |
| Os12t0511600-00 | Rice | cytosol | 27.27 | 4.09 |
| Os12t0204600-01 | Rice | cytosol, extracellular | 4.81 | 1.41 |
| Os12t0204800-01 | Rice | cytosol | 3.74 | 1.07 |
| Os12t0209901-01 | Rice | cytosol, nucleus | 2.14 | 0.86 |
| Os12t0511500-01 | Rice | cytosol | 2.14 | 0.78 |
| Os12t0512400-01 | Rice | cytosol | 1.6 | 0.7 |
| HORVU3Hr1G116520.1 | Barley | golgi, peroxisome, plasma membrane | 0.53 | 0.52 |
| Os11t0615900-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os12t0209800-01 | EnsemblPlantsGene:Os12g0209800 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF704 | ProteinID:BAT16312.1 |
| SEG:seg | SUPFAM:SSF52058 | UniParc:UPI000393B6CF | UniProt:A0A0P0Y7Z7 | MapMan:35.2 | : |
Description
Similar to NB-ARC domain containing protein, expressed. (Os12t0209800-01)
Coordinates
chr12:-:5740543..5747593
Molecular Weight (calculated)
20911.3 Da
IEP (calculated)
8.333
GRAVY (calculated)
-0.298
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: RRCAKLTKFG SSVNPYVSGG EEEHLVDSRS SLRISSLTID LPSLLLVEPL KSLCHTEHLE IEDASQMKSL PDRWLLQNSA SLKSLHIRKV KSLESLQPSM
101: RDLTSLQKLT LSGVGQLLGS LPDFPTSLLE LDISECGSEL KKKFRKHGSP ERSKIAHILR VRIDTDYNYI NITGSSLFIM GKECYGE
101: RDLTSLQKLT LSGVGQLLGS LPDFPTSLLE LDISECGSEL KKKFRKHGSP ERSKIAHILR VRIDTDYNYI NITGSSLFIM GKECYGE
001: MVPWSATVSG AVNISNTSNY TLSDYILTRR MYKLIFFFVR VDETDMIENI AAYISSRFQN SAVIEDIKGS YPKPRFDEDL QIFCKYAFNQ KTPEDGFDEL
101: AREITYHVGE LPLGLKVIGS HFRGLSKEQW PMEVSRLRTY RNGDIERILK FSYDALCDED KDLFLHIACF FNMEKITKVK ELFGHRFKDL RQSLHILEMK
201: SLISIEHTDL EDSEYYESIN MRNLLVQLGQ EIVRKESVLE PGQRRFLIDY KDICAVVSGH TTITGSVVGI DSKNWLSITE KSFKGMSNLQ FLRVKNDLYH
301: PNIISSPGPL TFISPKLRLL DWSCFPMTSL RFINNLEFLV ELRMCYSKLE KLWDGIQLVR NLKHMDLTDS RNLKELPNLS MATNLKNLNL ERCSSLVELP
401: SSIGNATSLH DLRLFKCSSL VELPFSIGNL TNLWKLDLRE CSSLVSLPQL PDSIMVLNAR NCESLEKLDC SFYNPEVPAC FTYRSHGSSV SVKVNQKLLH
501: TSTKFKACIL FENEVDNETY YFDLDTLCVY TKTNKDCILL DNKGEDDEVG IQKRGLVSCR IGSEWRFSEW YPFITDHLYI FEVEAKEVTS TELIFYFEIF
601: DEYSKAREIK ECGIIHLLEH HVDDEEKMDT IEKEPKVHI
101: AREITYHVGE LPLGLKVIGS HFRGLSKEQW PMEVSRLRTY RNGDIERILK FSYDALCDED KDLFLHIACF FNMEKITKVK ELFGHRFKDL RQSLHILEMK
201: SLISIEHTDL EDSEYYESIN MRNLLVQLGQ EIVRKESVLE PGQRRFLIDY KDICAVVSGH TTITGSVVGI DSKNWLSITE KSFKGMSNLQ FLRVKNDLYH
301: PNIISSPGPL TFISPKLRLL DWSCFPMTSL RFINNLEFLV ELRMCYSKLE KLWDGIQLVR NLKHMDLTDS RNLKELPNLS MATNLKNLNL ERCSSLVELP
401: SSIGNATSLH DLRLFKCSSL VELPFSIGNL TNLWKLDLRE CSSLVSLPQL PDSIMVLNAR NCESLEKLDC SFYNPEVPAC FTYRSHGSSV SVKVNQKLLH
501: TSTKFKACIL FENEVDNETY YFDLDTLCVY TKTNKDCILL DNKGEDDEVG IQKRGLVSCR IGSEWRFSEW YPFITDHLYI FEVEAKEVTS TELIFYFEIF
601: DEYSKAREIK ECGIIHLLEH HVDDEEKMDT IEKEPKVHI
Arabidopsis Description
ATP binding protein [Source:UniProtKB/TrEMBL;Acc:F4I847]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.