Factsheet for Os06t0304700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0209800-01	Rice	cytosol, plasma membrane	9.26	29.41
Os12t0511600-00	Rice	cytosol	33.67	16.04
Os02t0504200-00	Rice	cytosol	33.5	15.44
Os12t0511400-02	Rice	cytosol	33.0	15.42
Os04t0378575-00	Rice	extracellular, plasma membrane	31.82	14.91
Os12t0511900-00	Rice	cytosol	28.45	14.81
Os11t0615900-01	Rice	cytosol	0.67	4.4
Os12t0204800-01	Rice	cytosol	2.19	1.99
Os12t0511500-01	Rice	cytosol	1.68	1.94
Os12t0209901-01	Rice	cytosol, nucleus	1.35	1.72
Os12t0204600-01	Rice	cytosol, extracellular	1.85	1.72
Os12t0512400-01	Rice	cytosol	0.84	1.16
HORVU3Hr1G116520.1	Barley	golgi, peroxisome, plasma membrane	0.17	0.52

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	ProteinID:BAF19381.2	ProteinID:BAS97404.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
EnsemblPlantsGene:Os06g0304700	EnsemblPlants:Os06t0304700-01	PANTHER:PTHR23155	PANTHER:PTHR23155:SF704	UniProt:Q0DCP2	SUPFAM:SSF52058
UniParc:UPI0001B67016	:	:	:	:	:

Description

Conserved hypothetical protein. (Os06t0304700-01)

Coordinates

chr6:+:11502037..11506377

Molecular Weight (calculated)

66524.8 Da

IEP (calculated)

6.404

GRAVY (calculated)

0.110

Length

594 amino acids

Sequence
(BLAST)

001: VCLRNLHVPY DTISSIPRIG KLTCLEYLNA FSVQKRIGHT VCELKNLSQL HHLRLRDIQN VGSCKEVLDA NLKDKKHMRT FSLHWSSHEV IAENVSDLVL
101: DYLQPHSDLE ELDIIGFSGT RLPFWITDSY LVNIVSLNII NCCKIEHVPS LASLCSLKNL FLQDLSLLAS MGCMLHECDK IPVGCSHSFQ ECPSSIDMSE
201: GMVDVESEGV SFPPHLSTLT IRGCPQLMKL PTLPSMLKQL KIEKSGLMLL PKMYQKHNDT EGSFPCPNES QLTNVLIEYC PNLNSLLHCF LGQNVTLTSL
301: RELRINQCEK LEYLPLNGLM ELVNLQILEV SDCSMLKKSG MEVKLLPSSL EQLSIKSCGE LANILIDLLA GLEALTFLEL ANCSHLISLP TVKTFETLTA
401: LKELRLYGCP ELSSLGGLQC LKSLRLLIIR GCCSLTKISS LPPPLQCWSS QDDSTENSLK LGTLFIDDHS LLFVEPLRSV RFTRRLSLLD DPIMTSLPEQ
501: WLLQNRTTLS ILWLWNVKSL QCLPSSMKDL CHLQSFTLFN APLVNSLPDM PASLKDLIID CCQIALAERC RKGGCDWSKI AHVTLLKING NEPL

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.