Factsheet for Os04t0480600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0480700-01	Rice	endoplasmic reticulum	79.84	39.53
TraesCS2D01G337800.1	Wheat	endoplasmic reticulum	57.71	28.63
KXG26566	Sorghum	endoplasmic reticulum, plasma membrane	58.5	28.03
TraesCS2B01G357200.1	Wheat	endoplasmic reticulum	56.52	27.98
EES12375	Sorghum	endoplasmic reticulum	55.34	27.29
EES12376	Sorghum	endoplasmic reticulum	54.94	27.25
HORVU2Hr1G083020.3	Barley	endoplasmic reticulum	54.15	26.6
TraesCS2A01G325100.1	Wheat	mitochondrion, plastid	56.13	26.54
Zm00001d003283_P001	Maize	endoplasmic reticulum	55.34	25.88
KRH57161	Soybean	endoplasmic reticulum	42.29	21.44
OQU81806	Sorghum	endoplasmic reticulum, golgi	37.15	21.22
PGSC0003DMT400078178	Potato	endoplasmic reticulum, golgi	41.9	21.07
Solyc06g076160.2.1	Tomato	nucleus	41.5	20.83
Os12t0268000-01	Rice	plasma membrane	42.29	20.46
Os12t0512800-01	Rice	endoplasmic reticulum	39.13	18.97
Os03t0568400-00	Rice	plastid	20.95	16.77
Os04t0480650-00	Rice	endoplasmic reticulum, extracellular	4.74	5.69
Os07t0293000-00	Rice	endoplasmic reticulum, golgi, plastid	3.56	2.73

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:BAF15017.2	ProteinID:BAS89733.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020
GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550
GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EnsemblPlantsGene:Os04g0480600	EnsemblPlants:Os04t0480600-01	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF92	UniProt:Q0JCC0
SUPFAM:SSF48264	UniParc:UPI0001B65DF5	SEG:seg	:	:	:

Description

Similar to Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1) (ARP-2). (Os04t0480600-01)

Coordinates

chr4:-:24044380..24045225

Molecular Weight (calculated)

27799.1 Da

IEP (calculated)

6.372

GRAVY (calculated)

-0.293

Length

253 amino acids

Sequence
(BLAST)

001: VDELESCTQD SNTTPLVLPS FPGHVDRSKP NCVVLQDMFI AGSDTSAVTV QWAMTELVRN PDVLAKAQHE VRRVIAGGGG GDKDGAMVRE ADLPELHYLR
101: LVIKETLRLH PASPLVQRET TEPFRTAHGV EIPARTRVVI NAMAIHTDPG VWGPNAERFL PERHRAHDAD GEQQHEHDGF ALVPFGIGRR SCPGVHFAAA
201: AAELLLANLL FCFDWRALPG REVDVEEENG LAVRKKNPLV LIATKSKSNR DAH

Best Arabidopsis Sequence Match ( AT3G26210.1 )
(BLAST)

001: MSIFLCFLLL LLLLLVTIIF TRKSQSSKLK LPPGPPKLPI IGNLHYLNGL PHKCLLNLWK IHGPVMQLQL GYVPLVVISS NQAAEEVLKT HDLDCCSRPE
101: TIASKTISYN FKDIGFAPYG EEWRALRKLA VIELFSLKKF NSFRYIREEE NDLLVKKLSE ASEKQSPVNL KKALFTLSAS IVCRLAFGQN LHESEFIDED
201: SMEDLASRSE KIQAKFAFSN FFPGGWILDK ITGQSKSLNE IFADLDGFFN QVLDDHLKPG RKVLETPDVV DVMIDMMNKQ SQDGSFKLTT DHIKGIISDI
301: FLAGVNTSAT TILWAMTELI RNPRVMKKVQ DEVRTVLGEK RDRITEQDLN QLNYFKLVIK ETFRLHPAAP LLLPREAMAK IKIQGYDIPE KTQIMVNVYA
401: IGRDPDLWEN PEEFKPERFV DSSVDYRGLN FELLPFGSGR RICPGMTMGI ATVELGLLNL LYFFDWGLPE GRTVKDIDLE EEGAIIIGKK VSLELVPTRR
501: Q

Arabidopsis Description

CYP71B23Cytochrome P450 71B23 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTM0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.