Factsheet for PGSC0003DMT400078178

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g076160.2.1	Tomato	nucleus	94.04	93.85
KRH57161	Soybean	endoplasmic reticulum	56.26	56.71
PGSC0003DMT400080919	Potato	cytosol	30.82	45.06
PGSC0003DMT400080921	Potato	extracellular, golgi	43.94	45.01
PGSC0003DMT400042825	Potato	extracellular, golgi	44.14	44.76
PGSC0003DMT400068437	Potato	endoplasmic reticulum	45.33	44.71
PGSC0003DMT400080925	Potato	endoplasmic reticulum	43.74	44.27
TraesCS2D01G337800.1	Wheat	endoplasmic reticulum	44.53	43.92
Os04t0480700-01	Rice	endoplasmic reticulum	44.33	43.64
PGSC0003DMT400054278	Potato	cytosol	36.38	43.57
TraesCS2B01G357200.1	Wheat	endoplasmic reticulum	43.94	43.25
KXG26566	Sorghum	endoplasmic reticulum, plasma membrane	45.13	42.99
PGSC0003DMT400068847	Potato	endoplasmic reticulum, vacuole	42.74	42.74
PGSC0003DMT400015433	Potato	endoplasmic reticulum, extracellular, plasma membrane	40.16	42.71
PGSC0003DMT400051239	Potato	cytosol	32.6	42.38
PGSC0003DMT400056301	Potato	extracellular, golgi	38.57	42.17
TraesCS2A01G325100.1	Wheat	mitochondrion, plastid	44.73	42.06
Os04t0480600-01	Rice	cytosol	21.07	41.9
PGSC0003DMT400029453	Potato	cytosol, endoplasmic reticulum, plastid	39.56	41.81
EES12375	Sorghum	endoplasmic reticulum	42.54	41.72
PGSC0003DMT400054280	Potato	extracellular, golgi, plasma membrane	37.97	41.43
PGSC0003DMT400080928	Potato	extracellular, golgi, plasma membrane	40.76	41.33
Os04t0480650-00	Rice	endoplasmic reticulum, extracellular	17.1	40.76
EES12376	Sorghum	endoplasmic reticulum	40.95	40.39
PGSC0003DMT400056298	Potato	endoplasmic reticulum, golgi	32.21	39.51
OQU81806	Sorghum	endoplasmic reticulum, golgi	34.79	39.5
Zm00001d003283_P001	Maize	endoplasmic reticulum	41.55	38.63
HORVU2Hr1G083020.3	Barley	endoplasmic reticulum	29.82	29.13

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102595891	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M1CZJ8	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400030413	PGSC:PGSC0003DMG400030413
EnsemblPlants:PGSC0003DMT400078178	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF92
SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI000296AED7	RefSeq:XP_006350771.2	SEG:seg	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400030413]

Coordinates

chr6:-:56652211..56656069

Molecular Weight (calculated)

57524.8 Da

IEP (calculated)

8.311

GRAVY (calculated)

-0.205

Length

503 amino acids

Sequence
(BLAST)

001: MSFIFFLKML ASFFLFLFIL FSFTKKKNKG KKLLPSPRKL PIIGNLHQLG KLPHRSLQKL SNEYGDLIFL QLGSIPTLLV SSADVAKEIF RVHDVAFAGR
101: PPLYAAKRLS YNCCNVSFAP YGNYWREARK ILALELLSAK RVESFSSIRD EEVSRLIQEI GKSLNSSINI SALALTLSNN VVCRVAFGKG SDDESGYDNG
201: GKKFHEILYD TQELLGEFNV ADYFPKMAWI NKFNGLDERL EKNFRELDKY YDKVIEDHVD SRNWIKEKDD EDLVDVLLRI QKDPNRDVPL QDSHIKGLLA
301: DIFIAGTDTS ATTIEWIMAE LMLNPKVMKK VQQEVRQVAK GKQKVQETDL YKLEYMKLVI KESLRLHPPA PLLIPRVTTS SCKIMDYEIP ENTRVLINAT
401: AIGTDPKYWE NPLTFIPERF LNKDIDYRGQ NYEFLPFGAG RRGCPGINFS VPLVELAIAN LLFHYDWTLP QGLKAKDLDM EEALGITMHK KIPLCLAASY
501: YDL

Best Arabidopsis Sequence Match ( AT3G26290.1 )
(BLAST)

001: MDSIWILSLL FFIIFLLLAA FKRKNHGKHR RIPSPPGFPI IGNLHQLGEL QHQSLWKLSK KYGPVMLLKL GKVPTLILSS SETAKQALRD YDLHCCSRPS
101: LAGGRELSYN NLDMSSSPYN EYWKELRKLC SQELFSANKI QSIQPIKDEE VKKVIDSIAE SSSLKNPVNL SKTFLALTTS VVCKAAFGVS FEGSVLNSDR
201: FNKLVRDTFE MLGSFSASDF IPYVGWIIDK FNGLQGWRKK SFRDLDAFYE QIFDLHKEEK EVGSEDLVDV LLRLEKEEIV VGNGKLTRNH IKAILMNILL
301: GGIDTSAITM TWAMAELAKN PRVMKKVQAE IRNQIKNKER ISFDDTDKLE YLKMVIKETW RLHPPTPLLL PRDVITEFEI NGYTIPAKTR LHVNVWAIGR
401: DPDTWKDPEM FLPERFNDSN IDAKGQNFEL LSFGSGRRIC PGLYMGTTMV EFGLANMLYH FDWKLPEGMV VEDIDMEEAP GLTVSKKSEL VLVPVKYLDH

Arabidopsis Description

CYP71B26Cytochrome P450, family 71, subfamily B, polypeptide 26 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRI3]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.