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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0242000-01 Rice cytosol 69.07 72.96
HORVU7Hr1G040170.1 Barley cytosol 57.87 60.96
Os02t0719600-01 Rice cytosol 53.87 53.16
Os06t0311800-00 Rice cytosol 48.0 51.58
GSMUA_Achr10P... Banana cytosol 50.13 50.4
GSMUA_Achr7P20290_001 Banana cytosol 50.13 50.27
Os06t0244000-01 Rice golgi 53.33 50.13
Os06t0313320-00 Rice peroxisome, vacuole 47.2 49.3
GSMUA_Achr7P20280_001 Banana cytosol 48.8 48.93
GSMUA_Achr7P20400_001 Banana cytosol 26.13 48.51
GSMUA_AchrUn_... Banana cytosol 48.53 48.4
GSMUA_Achr7P20410_001 Banana cytosol 47.47 47.72
GSMUA_Achr7P20380_001 Banana cytosol 47.2 47.71
GSMUA_Achr7P20390_001 Banana cytosol 32.27 47.45
Os11t0256600-00 Rice cytosol 48.0 46.51
Os11t0259700-01 Rice cytosol 47.73 46.13
GSMUA_Achr7P20420_001 Banana cytosol 44.53 45.26
GSMUA_Achr7P20300_001 Banana cytosol 50.67 44.92
PGSC0003DMT400004564 Potato cytosol, mitochondrion, nucleus 26.67 43.86
Solyc01g080990.2.1 Tomato cytosol 41.33 43.66
KRH08180 Soybean cytosol 42.93 43.51
Solyc01g080970.2.1 Tomato cytosol 37.33 43.48
KRH69876 Soybean cytosol 42.4 42.97
VIT_04s0023g02230.t01 Wine grape cytosol 40.0 42.25
KRH08181 Soybean cytosol 38.93 42.2
VIT_04s0023g02200.t01 Wine grape cytosol 40.27 42.18
KRH08183 Soybean cytosol 41.33 41.89
Solyc09g091550.2.1 Tomato cytosol 40.27 41.83
PGSC0003DMT400004581 Potato cytosol 40.8 41.8
VIT_04s0023g02290.t01 Wine grape cytosol 34.67 41.8
KRH08182 Soybean cytosol, mitochondrion, plastid 41.07 41.62
VIT_04s0023g02240.t01 Wine grape cytosol 40.0 41.32
VIT_04s0023g02280.t01 Wine grape cytosol 36.0 41.28
CDY58433 Canola cytosol 34.67 41.27
KRH76742 Soybean cytosol 29.33 41.2
GSMUA_AchrUn_... Banana cytosol 48.27 41.04
VIT_04s0023g02260.t01 Wine grape plastid 26.67 40.82
KRH08176 Soybean cytosol 39.47 40.77
KRH69871 Soybean cytosol 40.53 40.75
CDY23695 Canola endoplasmic reticulum 24.53 40.71
PGSC0003DMT400076187 Potato cytosol 39.2 40.5
Os11t0257700-00 Rice cytosol 24.8 40.43
PGSC0003DMT400049166 Potato cytosol 38.13 40.4
VIT_04s0023g02220.t01 Wine grape cytosol 38.13 40.28
Solyc04g055260.2.1 Tomato nucleus 39.2 40.27
VIT_04s0023g02310.t01 Wine grape cytosol 38.93 40.11
Bra034838.1-P Field mustard cytosol 36.27 39.19
Solyc09g091540.1.1 Tomato cytosol 38.13 39.18
CDY69068 Canola cytosol 40.27 38.72
Solyc09g091530.1.1 Tomato cytosol 37.07 38.61
CDY44851 Canola cytosol 28.27 38.41
AT3G11480.1 Thale cress cytosol 38.4 37.99
Solyc01g081340.2.1 Tomato cytosol 36.27 37.67
KRH62438 Soybean cytosol, mitochondrion, peroxisome 25.87 37.6
CDY65325 Canola cytosol 34.93 37.32
KRH00866 Soybean cytosol 37.07 37.17
CDY01018 Canola endoplasmic reticulum 23.73 37.08
Bra001405.1-P Field mustard cytosol 37.87 37.08
CDX73874 Canola cytosol 37.87 37.08
AT5G66430.1 Thale cress cytosol 34.93 37.01
Bra009458.1-P Field mustard cytosol 31.47 36.99
CDY08522 Canola cytosol 26.93 36.73
KRH65522 Soybean cytosol 36.53 36.53
KRH60813 Soybean cytosol, plastid 35.73 36.51
KRH40363 Soybean cytosol 35.2 36.46
Solyc10g061840.1.1 Tomato cytosol 34.4 36.44
Bra009459.1-P Field mustard cytosol 32.0 36.25
CDX77965 Canola cytosol 24.8 36.19
Os01t0701700-01 Rice extracellular 36.53 36.15
KRH00865 Soybean cytosol 35.47 36.04
AT5G04370.2 Thale cress cytosol 39.47 35.66
AT5G38020.1 Thale cress cytosol 34.93 35.6
CDY44848 Canola cytosol 27.47 35.52
Bra022603.1-P Field mustard cytosol 27.2 35.42
CDY27054 Canola cytosol 27.2 35.42
CDY08520 Canola cytosol 36.0 35.25
Bra034836.1-P Field mustard cytosol 35.73 34.99
KRH40370 Soybean cytosol 34.4 34.96
Bra036847.1-P Field mustard cytosol 25.07 34.81
KRH00870 Soybean cytosol, mitochondrion, nucleus, plastid 34.93 34.47
CDY44849 Canola cytosol 36.0 34.44
CDY51318 Canola plastid 35.2 34.02
Bra009460.1-P Field mustard cytosol 35.47 33.93
CDX70231 Canola cytosol 35.47 33.93
Bra030012.1-P Field mustard cytosol 32.8 33.88
CDX83129 Canola cytosol 32.8 33.88
Os11t0256900-01 Rice cytosol 14.4 33.75
CDY19749 Canola cytosol 35.2 33.67
AT2G14060.1 Thale cress cytosol 33.33 33.6
CDX70229 Canola cytosol 35.2 33.59
Bra036601.1-P Field mustard cytosol 34.93 33.5
KRH40367 Soybean cytosol 28.8 33.44
Os06t0314600-01 Rice cytosol 30.13 33.43
CDY01022 Canola cytosol 25.87 33.33
CDY47999 Canola cytosol 34.93 33.25
CDX70232 Canola cytosol, plastid 33.33 33.24
CDX87021 Canola cytosol 34.67 33.16
CDX70230 Canola cytosol, plastid 34.67 32.99
Os06t0329900-01 Rice cytosol 32.0 32.79
AT5G04380.3 Thale cress cytosol 33.87 32.65
Os06t0315300-00 Rice cytosol 30.4 31.75
Os06t0313440-00 Rice cytosol 16.8 31.66
CDY54689 Canola cytosol 26.93 31.27
Os06t0315000-00 Rice cytosol 27.2 31.1
AT3G21950.2 Thale cress cytosol 33.07 31.0
CDX73768 Canola cytosol 33.07 30.24
Bra005802.1-P Field mustard cytosol 39.2 29.82
CDY11287 Canola cytosol 39.2 29.82
KRH00867 Soybean cytosol 34.93 29.37
Os05t0102000-01 Rice cytosol 27.47 27.61
CDY67082 Canola cytosol, plastid 19.2 26.97
VIT_12s0057g01060.t01 Wine grape cytosol 36.0 24.59
CDY51317 Canola mitochondrion 33.6 16.03
Protein Annotations
Gene3D:1.10.1200.270Gene3D:3.40.50.150EntrezGene:4340627MapMan:50.2.1EMBL:AK241207ProteinID:BAD37845.1
ProteinID:BAS97000.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740GO:GO:0032259InterPro:MeTrfase_7EnsemblPlantsGene:Os06g0241400EnsemblPlants:Os06t0241400-01PFAM:PF03492
PANTHER:PTHR31009PANTHER:PTHR31009:SF22UniProt:Q67VH4InterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI00004263C2
RefSeq:XP_015642784.1:::::
Description
SAM dependent carboxyl methyltransferase family protein. (Os06t0241400-01)
Coordinates
chr6:-:7341809..7344913
Molecular Weight (calculated)
42306.5 Da
IEP (calculated)
6.226
GRAVY (calculated)
-0.165
Length
375 amino acids
Sequence
(BLAST)
001: MNVNVEHDFH MVGGEGEISY AKNSRVQAKA MIEAKFVLDK AIRELYATLL ANIMVVADLG CSSGQNTLHF VSEVINIFTK HQNNLGQSDT VDLQFFLNDL
101: PGNDFNHLFR ILNTFTFKGA SNHKGDILPA YHIYGAPGSY YTRLFPPQAV HLFHSSLSLH WRSQVPEQLN GKQKSYLNEE NIYITKTTPL HVVKLFQEQF
201: IKDVSLFLKL RHEELVDGGR MVLTIYGRKS EDPYSGDVND IFGLLGKSLQ SLVAEGLVEK EKLDSFNLPV YGPSVGELEE IVNRVNLFDM DHMHLFECNW
301: DPYDDSQGDI VHDSALSGIN VANCVRAVTE PLIASHFGEG ILSALFTDYA HRVASHLEKE KTKFAWIVIS LKKRC
Best Arabidopsis Sequence Match ( AT5G04370.1 )
(BLAST)
001: MDSRFTDSTT TLRCNGKSEN ERKNGDEERI SKYSFVSPLC MRGGDGYNSY SSNSLLQRRV LSKAKPVLVK NTKDLMINLN FPTYIKVADL GCSSGQNTFL
101: AMSEIINTIN VFCQQRNQNP PEIDCCLNDL PSNDFNTTFK FIQFFNGMNI TSKESYFVYG VPGSFYSRLF PRRSLHFVHS SYGLHWLSKV PEGLEKNKMS
201: VYITNSSPLS TYKAYLNQFQ RDFATFLKLR SEEMVSNGRM VLTFIGRNTI DNPLHRDCCH FWTLLSKSLR DLVAEGLVSA SKVDSFYLPF YDPNEKEIKE
301: MVQKEGSFEI RDLETHGYDL GHCNQDESKR SKSGQNEANY IRAVSEPLLA AHFGDAIINI LFNKFACHVS QHVSCRNKTT VSIVVSLTKK KTFLMS
Arabidopsis Description
NAMT1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WL44]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.