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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030012.1-P Field mustard cytosol 80.43 81.54
CDX83129 Canola cytosol 80.43 81.54
CDY54689 Canola cytosol 67.12 76.47
AT3G21950.2 Thale cress cytosol 78.8 72.5
AT2G14060.1 Thale cress cytosol 58.15 57.53
AT5G66430.1 Thale cress cytosol 52.72 54.8
AT3G11480.1 Thale cress cytosol 51.9 50.4
AT5G04380.3 Thale cress cytosol 51.9 49.1
AT5G04370.2 Thale cress cytosol 51.63 45.78
VIT_04s0023g02200.t01 Wine grape cytosol 41.85 43.02
Solyc10g061840.1.1 Tomato cytosol 41.03 42.66
PGSC0003DMT400004581 Potato cytosol 42.39 42.62
Solyc01g080990.2.1 Tomato cytosol 40.76 42.25
TraesCS3A01G412200.1 Wheat cytosol 14.67 42.19
GSMUA_Achr7P20400_001 Banana cytosol 23.1 42.08
Solyc01g080970.2.1 Tomato cytosol 36.68 41.93
TraesCS3B01G513800.1 Wheat peroxisome 13.59 39.68
KRH40363 Soybean cytosol 38.86 39.5
KRH00866 Soybean cytosol 39.67 39.04
Zm00001d015216_P001 Maize cytosol 26.63 38.13
GSMUA_Achr7P20390_001 Banana cytosol 26.36 38.04
KRH60813 Soybean cytosol, plastid 37.77 37.87
KRH65522 Soybean cytosol 38.59 37.87
GSMUA_Achr10P... Banana cytosol 38.32 37.8
TraesCS3D01G466800.1 Wheat cytosol 16.3 37.74
TraesCSU01G212600.1 Wheat cytosol 27.45 37.69
KRH62438 Soybean cytosol, mitochondrion, peroxisome 26.36 37.6
Os06t0311800-00 Rice cytosol 35.6 37.54
KRH00865 Soybean cytosol 37.5 37.4
KRH40370 Soybean cytosol 37.5 37.4
Os02t0719600-01 Rice cytosol 38.59 37.37
Zm00001d052829_P001 Maize cytosol 38.04 37.23
AT4G36470.1 Thale cress cytosol 37.5 37.2
Os06t0313440-00 Rice cytosol 20.11 37.19
TraesCS3D01G406400.1 Wheat cytosol 20.11 37.19
Zm00001d052828_P001 Maize cytosol 36.68 37.09
TraesCS4B01G381300.1 Wheat cytosol 36.41 37.02
GSMUA_AchrUn_... Banana cytosol 37.77 36.97
HORVU7Hr1G007620.1 Barley cytosol 37.77 36.87
GSMUA_Achr7P20420_001 Banana cytosol 36.96 36.86
Os06t0313320-00 Rice peroxisome, vacuole 35.87 36.77
GSMUA_Achr7P20290_001 Banana cytosol 37.23 36.63
HORVU7Hr1G040170.1 Barley cytosol 35.33 36.52
AT1G19640.1 Thale cress cytosol 38.59 36.5
TraesCS7B01G102600.1 Wheat cytosol 36.68 36.39
TraesCSU01G170100.1 Wheat peroxisome 34.78 36.36
KRH00870 Soybean cytosol, mitochondrion, nucleus, plastid 37.5 36.32
HORVU0Hr1G020630.1 Barley cytosol 36.41 36.22
GSMUA_Achr7P20410_001 Banana cytosol 36.68 36.19
TraesCS5A01G197400.1 Wheat cytosol 33.7 36.15
TraesCS3B01G444900.1 Wheat cytosol 15.76 36.02
KXG36222 Sorghum cytosol 36.14 35.95
Zm00001d052827_P001 Maize cytosol 37.23 35.86
TraesCS7A01G224900.1 Wheat peroxisome 24.46 35.86
TraesCS7A01G196900.1 Wheat cytosol 36.14 35.85
TraesCS7A01G224200.1 Wheat cytosol 36.14 35.85
TraesCS7D01G198200.1 Wheat cytosol 36.14 35.85
TraesCS1B01G431600.1 Wheat cytosol 36.41 35.83
TraesCS7A01G224000.1 Wheat cytosol 35.33 35.81
TraesCS3A01G468600.1 Wheat cytosol 32.61 35.61
GSMUA_Achr7P20380_001 Banana cytosol 35.87 35.58
TraesCS5D01G193400.1 Wheat cytosol 18.75 35.57
GSMUA_Achr7P20280_001 Banana cytosol 36.14 35.56
TraesCSU01G190500.1 Wheat cytosol 29.08 35.55
TraesCSU01G190800.1 Wheat cytosol 29.08 35.55
TraesCSU01G219100.1 Wheat cytosol 29.08 35.55
TraesCSU01G230800.1 Wheat cytosol 29.08 35.55
TraesCS3A01G470800.1 Wheat cytosol 23.37 35.54
TraesCS6B01G378100.1 Wheat cytosol, nucleus, peroxisome 35.87 35.48
TraesCSU01G187700.1 Wheat peroxisome 29.35 35.41
HORVU7Hr1G046820.11 Barley cytosol 32.88 35.38
TraesCS3B01G513400.1 Wheat peroxisome 31.52 35.37
TraesCS7D01G225700.1 Wheat cytosol 35.6 35.31
TraesCS7D01G225800.1 Wheat cytosol 35.6 35.31
TraesCS1D01G410300.1 Wheat cytosol 35.87 35.29
EER98034 Sorghum cytosol 35.87 35.2
TraesCS7B01G190700.1 Wheat cytosol 35.33 35.14
TraesCS5B01G186200.3 Wheat cytosol 32.34 35.1
HORVU3Hr1G023150.1 Barley cytosol 35.33 35.04
TraesCSU01G201100.1 Wheat cytosol 35.6 35.03
TraesCSU01G208800.1 Wheat cytosol 35.6 35.03
TraesCS2A01G024500.1 Wheat cytosol 35.87 35.01
TraesCS2B01G036300.1 Wheat cytosol 35.87 35.01
TraesCS3B01G445000.1 Wheat cytosol 34.24 35.0
Os06t0241400-01 Rice cytosol 35.6 34.93
TraesCS3D01G462800.1 Wheat cytosol 33.97 34.92
HORVU3Hr1G100270.1 Barley cytosol, peroxisome, plastid 34.24 34.9
TraesCS4A01G445900.1 Wheat cytosol 35.05 34.86
Zm00001d052831_P001 Maize cytosol 36.96 34.78
TraesCS7A01G042400.1 Wheat cytosol 35.05 34.77
TraesCSU01G177400.1 Wheat cytosol 28.8 34.75
TraesCSU01G225900.1 Wheat cytosol 28.8 34.75
TraesCS2B01G034900.1 Wheat cytosol 35.6 34.75
EES15454 Sorghum cytosol 37.77 34.66
PGSC0003DMT400004564 Potato cytosol, mitochondrion, nucleus 21.47 34.65
Os06t0314600-01 Rice cytosol 31.79 34.62
TraesCS7A01G223900.1 Wheat cytosol 34.78 34.59
HORVU7Hr1G007840.2 Barley cytosol 34.78 34.5
TraesCS7A01G224100.1 Wheat cytosol 34.78 34.5
Os06t0315000-00 Rice cytosol 30.71 34.45
TraesCS7B01G194700.1 Wheat cytosol 33.7 34.44
TraesCS7D01G225600.1 Wheat cytosol 31.52 34.42
TraesCSU01G201200.1 Wheat cytosol 32.34 34.39
TraesCS3B01G512900.1 Wheat cytosol 33.42 34.36
HORVU3Hr1G091690.3 Barley cytosol, peroxisome 33.7 34.35
HORVU1Hr1G064400.1 Barley cytosol 34.78 34.32
Zm00001d015224_P001 Maize cytosol, endoplasmic reticulum 26.09 34.29
TraesCS3A01G471100.1 Wheat cytosol 33.42 34.26
TraesCS7D01G037800.1 Wheat cytosol 34.51 34.23
TraesCS3D01G464300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 33.42 34.17
TraesCS3A01G412100.1 Wheat cytosol 34.24 34.15
TraesCS6D01G327800.1 Wheat cytosol, nucleus, peroxisome 34.51 34.14
KXG19154 Sorghum plastid 35.87 34.11
Os11t0259700-01 Rice cytosol 35.87 34.02
TraesCSU01G051200.1 Wheat cytosol 32.07 34.01
TraesCS3B01G421400.1 Wheat cytosol 32.61 33.99
TraesCS3D01G466300.1 Wheat peroxisome 32.61 33.99
TraesCS3B01G445100.1 Wheat cytosol 32.88 33.99
HORVU2Hr1G026190.2 Barley cytosol 34.51 33.96
TraesCS6A01G345300.1 Wheat cytosol 30.98 33.93
TraesCS3D01G466900.1 Wheat peroxisome 33.15 33.89
TraesCSU01G175500.2 Wheat peroxisome 33.15 33.89
KXG29440 Sorghum cytosol 33.97 33.88
TraesCS2D01G026400.1 Wheat cytosol 34.78 33.86
TraesCS1A01G030400.1 Wheat peroxisome 32.88 33.8
TraesCS3B01G514300.1 Wheat cytosol 33.15 33.8
TraesCS5D01G560200.1 Wheat cytosol 32.88 33.7
OQU76323 Sorghum cytosol 33.15 33.7
TraesCS3A01G411600.1 Wheat cytosol 32.88 33.61
EER88049 Sorghum cytosol 32.61 33.52
TraesCS1D01G031100.1 Wheat peroxisome 32.61 33.52
TraesCS3D01G382000.1 Wheat cytosol 32.88 33.52
HORVU3Hr1G100080.1 Barley cytosol 32.61 33.43
HORVU3Hr1G100190.1 Barley cytosol 32.61 33.43
Os06t0315300-00 Rice cytosol 32.61 33.43
TraesCS3A01G411500.2 Wheat cytosol 32.61 33.43
TraesCS3A01G470600.1 Wheat peroxisome 32.61 33.33
TraesCS3B01G514000.1 Wheat cytosol 11.14 33.33
TraesCS3D01G406300.1 Wheat peroxisome 21.74 33.33
TraesCS7D01G229500.1 Wheat cytosol 32.61 33.33
TraesCS3B01G421500.3 Wheat cytosol 32.61 33.24
TraesCS3A01G470700.1 Wheat peroxisome 31.79 33.14
KRH40367 Soybean cytosol 29.08 33.13
TraesCS3B01G513100.1 Wheat peroxisome 32.34 33.06
OQU86548 Sorghum cytosol 33.97 32.98
HORVU3Hr1G081480.2 Barley plastid 32.34 32.96
Os06t0242000-01 Rice cytosol 31.79 32.96
TraesCS3A01G387400.1 Wheat peroxisome 19.84 32.88
TraesCS3B01G513300.1 Wheat cytosol 31.79 32.87
Os06t0244000-01 Rice golgi 35.6 32.83
Zm00001d036164_P001 Maize cytosol 32.34 32.78
TraesCS3B01G513200.1 Wheat peroxisome 32.07 32.78
OQU88491 Sorghum extracellular 35.6 32.59
Os06t0329900-01 Rice cytosol 32.34 32.51
KXG29438 Sorghum cytosol 32.07 32.51
TraesCS2B01G172500.1 Wheat cytosol 33.15 32.45
KXG19886 Sorghum cytosol 31.79 32.41
GSMUA_Achr7P20300_001 Banana cytosol 37.23 32.39
TraesCS2D01G151600.1 Wheat cytosol 32.88 32.35
KXG29202 Sorghum cytosol 32.61 32.34
Os11t0256600-00 Rice cytosol 33.97 32.3
KXG19696 Sorghum cytosol 33.7 32.29
TraesCS2D01G151700.1 Wheat cytosol 32.07 32.24
Os11t0257700-00 Rice cytosol 20.11 32.17
Os05t0102000-01 Rice cytosol 32.61 32.17
TraesCS3A01G471200.1 Wheat cytosol 31.52 32.13
TraesCS3B01G065700.1 Wheat peroxisome 30.43 32.09
TraesCS3B01G065800.1 Wheat peroxisome 30.43 32.09
TraesCS3D01G463700.1 Wheat cytosol 29.89 31.98
TraesCS3A01G387300.1 Wheat cytosol 31.25 31.86
EES18827 Sorghum cytosol 33.7 31.71
Zm00001d044762_P001 Maize cytosol 32.88 31.68
Zm00001d044763_P001 Maize cytosol 32.61 31.66
Zm00001d015217_P001 Maize cytosol 33.7 31.63
HORVU3Hr1G100240.10 Barley cytosol 32.07 31.55
Zm00001d035767_P001 Maize cytosol 33.42 31.54
KRH00867 Soybean cytosol 38.04 31.39
KXG19297 Sorghum cytosol 30.98 31.06
Zm00001d044765_P001 Maize cytosol 32.61 31.01
TraesCS3D01G406500.1 Wheat plastid 32.34 30.91
GSMUA_AchrUn_... Banana cytosol 36.41 30.39
OQU76154 Sorghum cytosol 34.24 30.36
HORVU3Hr1G100060.1 Barley peroxisome, plastid 31.52 30.21
OQU86546 Sorghum cytosol 32.07 30.1
HORVU5Hr1G124360.1 Barley plastid 33.15 29.76
OQU88585 Sorghum plastid 35.87 28.88
Os11t0256900-01 Rice cytosol 12.5 28.75
Zm00001d015220_P001 Maize cytosol 21.2 28.57
TraesCS3B01G513900.1 Wheat cytosol, endoplasmic reticulum 11.41 28.0
TraesCS3B01G514100.1 Wheat cytosol, endoplasmic reticulum 11.41 28.0
TraesCS3B01G514200.1 Wheat cytosol, endoplasmic reticulum 11.41 28.0
HORVU5Hr1G041680.2 Barley cytosol 14.13 22.51
Protein Annotations
Gene3D:1.10.1200.270Gene3D:3.40.50.150MapMan:50.2.1EntrezGene:833781ProteinID:AED94258.1EMBL:AK228053
ProteinID:ANM69432.1ArrayExpress:AT5G38020EnsemblPlantsGene:AT5G38020RefSeq:AT5G38020TAIR:AT5G38020RefSeq:AT5G38020-TAIR-G
EnsemblPlants:AT5G38020.1TAIR:AT5G38020.1Unigene:At.30445EMBL:BT006434GO:GO:0003674GO:GO:0003824
GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0009058
GO:GO:0009987GO:GO:0016740GO:GO:0032259InterPro:MeTrfase_7RefSeq:NP_001331111.1RefSeq:NP_198618.1
PFAM:PF03492PO:PO:0009005PO:PO:0020100PANTHER:PTHR31009PANTHER:PTHR31009:SF19UniProt:Q84MB1
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0000048BCCSEG:seg::
Description
At5g38020 [Source:UniProtKB/TrEMBL;Acc:Q84MB1]
Coordinates
chr5:-:15165642..15167864
Molecular Weight (calculated)
41644.7 Da
IEP (calculated)
6.621
GRAVY (calculated)
-0.319
Length
368 amino acids
Sequence
(BLAST)
001: MGVLSMKGGD GEHSYANNSE GQKRLASDAK PVVVETVKEM IVKTDFPGCI KVADLGCSSG ENTLLVMSEI VNTIITSYQQ KGKNLPEINC CLNDLPDNDF
101: NTTFKLVPAF HKLLKMDVKG KCFISGVPGS FYSRLFPSKS LHFVHSSLCL HWLSKVPDGL EDNKKNVYLR SPCPPNVYKS YLTQFKNDFS LFLRLRADET
201: VPNGRMALTF VGRKSLDPLS KDCFQNWSSI SDSLLDLVSE GIVKESDVDS FNLPFYNPDE SEVREVIESE GSFKISNFET IFGLLFSYKT GRTEVKDDDD
301: NLDQSCRFEV IRKRASIIRS ITEPMLGAHF GDAIMDRLFE RYTYHLAERY DTLRNKPTVQ FFVSLTRK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.