Factsheet for TraesCSU01G187700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G177400.1	Wheat	cytosol	98.69	98.69
TraesCSU01G225900.1	Wheat	cytosol	98.69	98.69
TraesCS3B01G513400.1	Wheat	peroxisome	89.84	83.54
TraesCSU01G190500.1	Wheat	cytosol	62.3	63.12
TraesCSU01G190800.1	Wheat	cytosol	62.3	63.12
TraesCSU01G219100.1	Wheat	cytosol	62.3	63.12
TraesCSU01G230800.1	Wheat	cytosol	62.3	63.12
TraesCSU01G170100.1	Wheat	peroxisome	71.48	61.93
TraesCSU01G175500.2	Wheat	peroxisome	66.56	56.39
TraesCSU01G051200.1	Wheat	cytosol	62.62	55.04
Os06t0329900-01	Rice	cytosol	58.69	48.91
Zm00001d036164_P001	Maize	cytosol	48.52	40.77
VIT_04s0023g02260.t01	Wine grape	plastid	28.52	35.51
CDY58433	Canola	cytosol	35.74	34.6
CDY23695	Canola	endoplasmic reticulum	25.25	34.07
Solyc01g080970.2.1	Tomato	cytosol	35.41	33.54
KRH08181	Soybean	cytosol	38.03	33.53
VIT_04s0023g02230.t01	Wine grape	cytosol	39.02	33.52
TraesCSU01G201200.1	Wheat	cytosol	37.7	33.24
VIT_04s0023g02280.t01	Wine grape	cytosol	35.41	33.03
CDY01018	Canola	endoplasmic reticulum	25.9	32.92
VIT_04s0023g02240.t01	Wine grape	cytosol	38.69	32.51
VIT_04s0023g02310.t01	Wine grape	cytosol	38.69	32.42
Bra009459.1-P	Field mustard	cytosol	35.08	32.33
VIT_04s0023g02290.t01	Wine grape	cytosol	32.79	32.15
Bra009458.1-P	Field mustard	cytosol	33.44	31.97
CDY44851	Canola	cytosol	28.85	31.88
TraesCSU01G212600.1	Wheat	cytosol	27.87	31.72
VIT_04s0023g02220.t01	Wine grape	cytosol	36.72	31.55
KRH62438	Soybean	cytosol, mitochondrion, peroxisome	26.56	31.4
Bra034838.1-P	Field mustard	cytosol	35.08	30.84
TraesCSU01G201100.1	Wheat	cytosol	37.7	30.75
TraesCSU01G208800.1	Wheat	cytosol	37.7	30.75
CDY01022	Canola	cytosol	29.18	30.58
KRH08176	Soybean	cytosol	36.39	30.58
KRH08180	Soybean	cytosol	37.05	30.54
KRH08182	Soybean	cytosol, mitochondrion, plastid	37.05	30.54
KRH69876	Soybean	cytosol	37.05	30.54
KRH76742	Soybean	cytosol	26.56	30.34
KRH08183	Soybean	cytosol	36.39	30.0
Solyc04g055260.2.1	Tomato	nucleus	35.74	29.86
Bra022603.1-P	Field mustard	cytosol	27.87	29.51
PGSC0003DMT400049166	Potato	cytosol	34.1	29.38
AT5G38020.1	Thale cress	cytosol	35.41	29.35
KRH00865	Soybean	cytosol	35.41	29.27
CDY27054	Canola	cytosol	27.54	29.17
Solyc09g091550.2.1	Tomato	cytosol	34.43	29.09
VIT_04s0023g02200.t01	Wine grape	cytosol	34.1	29.05
CDY44848	Canola	cytosol	27.54	28.97
AT5G66430.1	Thale cress	cytosol	33.44	28.81
PGSC0003DMT400004581	Potato	cytosol	34.43	28.69
KRH69871	Soybean	cytosol	35.08	28.69
Bra030012.1-P	Field mustard	cytosol	34.1	28.65
CDX83129	Canola	cytosol	34.1	28.65
Solyc10g061840.1.1	Tomato	cytosol	33.11	28.53
Solyc09g091540.1.1	Tomato	cytosol	34.1	28.49
CDY65325	Canola	cytosol	32.79	28.49
KRH40370	Soybean	cytosol	34.43	28.46
PGSC0003DMT400076187	Potato	cytosol	33.77	28.37
KRH60813	Soybean	cytosol, plastid	34.1	28.34
Solyc09g091530.1.1	Tomato	cytosol	33.44	28.33
KRH65522	Soybean	cytosol	34.75	28.27
Solyc01g081340.2.1	Tomato	cytosol	33.44	28.25
CDX70232	Canola	cytosol, plastid	34.75	28.19
CDX77965	Canola	cytosol	23.61	28.02
CDY69068	Canola	cytosol	35.74	27.95
Bra001405.1-P	Field mustard	cytosol	35.08	27.94
CDY08520	Canola	cytosol	35.08	27.94
Solyc01g080990.2.1	Tomato	cytosol	32.46	27.89
AT3G11480.1	Thale cress	cytosol	34.43	27.7
Bra034836.1-P	Field mustard	cytosol	34.75	27.68
CDX73874	Canola	cytosol	34.75	27.68
KRH40363	Soybean	cytosol	32.79	27.62
KRH00866	Soybean	cytosol	33.77	27.54
KRH40367	Soybean	cytosol	28.85	27.24
CDX70230	Canola	cytosol, plastid	35.08	27.16
Bra036601.1-P	Field mustard	cytosol	34.75	27.11
CDY19749	Canola	cytosol	34.75	27.04
CDY44849	Canola	cytosol	34.75	27.04
CDX87021	Canola	cytosol	34.43	26.79
AT5G04380.3	Thale cress	cytosol	34.1	26.74
Bra036847.1-P	Field mustard	cytosol	23.61	26.67
AT2G14060.1	Thale cress	cytosol	32.46	26.61
CDY54689	Canola	cytosol	27.87	26.32
Bra009460.1-P	Field mustard	cytosol	33.77	26.28
CDX70231	Canola	cytosol	33.77	26.28
CDY08522	Canola	cytosol	23.61	26.18
CDY47999	Canola	cytosol	33.77	26.14
KRH00870	Soybean	cytosol, mitochondrion, nucleus, plastid	32.46	26.05
CDX70229	Canola	cytosol	33.44	25.95
AT5G04370.2	Thale cress	cytosol	35.08	25.78
AT3G21950.2	Thale cress	cytosol	33.77	25.75
CDY51318	Canola	plastid	32.46	25.52
CDY67082	Canola	cytosol, plastid	21.64	24.72
CDX73768	Canola	cytosol	33.11	24.63
PGSC0003DMT400004564	Potato	cytosol, mitochondrion, nucleus	18.36	24.56
KRH00867	Soybean	cytosol	32.79	22.42
Bra005802.1-P	Field mustard	cytosol	34.75	21.5
CDY11287	Canola	cytosol	34.75	21.5
VIT_12s0057g01060.t01	Wine grape	cytosol	32.13	17.85
CDY51317	Canola	mitochondrion	35.08	13.61

Protein Annotations

EnsemblPlants:TraesCSU01G187700.1	EnsemblPlantsGene:TraesCSU01G187700	Gene3D:1.10.1200.270	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:MeTrfase_7	InterPro:SAM-dependent_MTases
PANTHER:PTHR31009	PANTHER:PTHR31009:SF39	PFAM:PF03492	SUPFAM:SSF53335	MapMan:50.2.1	:

Description

No Description!

Coordinates

chrUn:-:282475830..282477046

Molecular Weight (calculated)

34225.3 Da

IEP (calculated)

7.119

GRAVY (calculated)

-0.110

Length

305 amino acids

Sequence
(BLAST)

001: MVIADLGCSS GPNALTLVST AVEAIMSHSL QFQHPPPEVS VLLNDLPHND FNMVVKSLVT LRQSNNKFVL VTGVTPGSFY ERLFTSDSMH LICSSNNLHL
101: LSKAPEDLSR NHIPAYDTDE HARHERLRMV RKAYARQFRK DFTLFLKLRD KELVPGGRMV LSLVGRCSDV IASNFFHIWE TAAQILGVIA SKGVIAKEKF
201: DSFYIPMYGP SAEELKEIIE EQGSFSIRDM RVYDPRADMD RALFTPSWLA KQKGAIFEPI IVEHFGAVMD EFERVTERRL SLEGGMQGDH ARTSRAVLAV
301: SLAKA

Best Arabidopsis Sequence Match ( AT5G04370.1 )
(BLAST)

001: MDSRFTDSTT TLRCNGKSEN ERKNGDEERI SKYSFVSPLC MRGGDGYNSY SSNSLLQRRV LSKAKPVLVK NTKDLMINLN FPTYIKVADL GCSSGQNTFL
101: AMSEIINTIN VFCQQRNQNP PEIDCCLNDL PSNDFNTTFK FIQFFNGMNI TSKESYFVYG VPGSFYSRLF PRRSLHFVHS SYGLHWLSKV PEGLEKNKMS
201: VYITNSSPLS TYKAYLNQFQ RDFATFLKLR SEEMVSNGRM VLTFIGRNTI DNPLHRDCCH FWTLLSKSLR DLVAEGLVSA SKVDSFYLPF YDPNEKEIKE
301: MVQKEGSFEI RDLETHGYDL GHCNQDESKR SKSGQNEANY IRAVSEPLLA AHFGDAIINI LFNKFACHVS QHVSCRNKTT VSIVVSLTKK KTFLMS

Arabidopsis Description

NAMT1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WL44]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.