Factsheet for TraesCSU01G225900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G177400.1	Wheat	cytosol	100.0	100.0
TraesCSU01G187700.1	Wheat	peroxisome	98.69	98.69
TraesCS3B01G513400.1	Wheat	peroxisome	88.52	82.32
TraesCSU01G190500.1	Wheat	cytosol	61.31	62.13
TraesCSU01G190800.1	Wheat	cytosol	61.31	62.13
TraesCSU01G219100.1	Wheat	cytosol	61.31	62.13
TraesCSU01G230800.1	Wheat	cytosol	61.31	62.13
TraesCSU01G170100.1	Wheat	peroxisome	70.49	61.08
TraesCSU01G175500.2	Wheat	peroxisome	65.57	55.56
TraesCSU01G051200.1	Wheat	cytosol	61.97	54.47
Os06t0329900-01	Rice	cytosol	57.7	48.09
Zm00001d036164_P001	Maize	cytosol	47.87	40.22
VIT_04s0023g02260.t01	Wine grape	plastid	27.54	34.29
CDY58433	Canola	cytosol	35.08	33.97
KRH08181	Soybean	cytosol	37.38	32.95
TraesCSU01G201200.1	Wheat	cytosol	37.38	32.95
CDY23695	Canola	endoplasmic reticulum	24.26	32.74
VIT_04s0023g02230.t01	Wine grape	cytosol	38.03	32.68
Solyc01g080970.2.1	Tomato	cytosol	34.43	32.61
VIT_04s0023g02280.t01	Wine grape	cytosol	34.43	32.11
Bra009459.1-P	Field mustard	cytosol	34.43	31.72
VIT_04s0023g02240.t01	Wine grape	cytosol	37.7	31.68
CDY01018	Canola	endoplasmic reticulum	24.92	31.67
Bra009458.1-P	Field mustard	cytosol	33.11	31.66
VIT_04s0023g02310.t01	Wine grape	cytosol	37.7	31.59
VIT_04s0023g02290.t01	Wine grape	cytosol	32.13	31.51
TraesCSU01G212600.1	Wheat	cytosol	27.54	31.34
CDY44851	Canola	cytosol	28.2	31.16
VIT_04s0023g02220.t01	Wine grape	cytosol	36.07	30.99
TraesCSU01G201100.1	Wheat	cytosol	37.38	30.48
TraesCSU01G208800.1	Wheat	cytosol	37.38	30.48
KRH76742	Soybean	cytosol	26.56	30.34
KRH62438	Soybean	cytosol, mitochondrion, peroxisome	25.57	30.23
KRH08182	Soybean	cytosol, mitochondrion, plastid	36.39	30.0
KRH69876	Soybean	cytosol	36.39	30.0
Bra034838.1-P	Field mustard	cytosol	34.1	29.97
KRH08176	Soybean	cytosol	35.41	29.75
KRH08180	Soybean	cytosol	36.07	29.73
CDY01022	Canola	cytosol	28.2	29.55
KRH08183	Soybean	cytosol	35.74	29.46
Solyc04g055260.2.1	Tomato	nucleus	35.08	29.32
Bra022603.1-P	Field mustard	cytosol	27.21	28.82
AT5G38020.1	Thale cress	cytosol	34.75	28.8
PGSC0003DMT400049166	Potato	cytosol	33.11	28.53
CDY27054	Canola	cytosol	26.89	28.47
KRH00865	Soybean	cytosol	34.43	28.46
CDY44848	Canola	cytosol	26.89	28.28
Solyc09g091550.2.1	Tomato	cytosol	33.44	28.25
AT5G66430.1	Thale cress	cytosol	32.79	28.25
VIT_04s0023g02200.t01	Wine grape	cytosol	33.11	28.21
PGSC0003DMT400004581	Potato	cytosol	33.77	28.14
Bra030012.1-P	Field mustard	cytosol	33.44	28.1
CDX83129	Canola	cytosol	33.44	28.1
CDX77965	Canola	cytosol	23.61	28.02
CDX70232	Canola	cytosol, plastid	34.43	27.93
CDY65325	Canola	cytosol	32.13	27.92
KRH69871	Soybean	cytosol	34.1	27.88
Solyc10g061840.1.1	Tomato	cytosol	32.13	27.68
Solyc09g091540.1.1	Tomato	cytosol	33.11	27.67
KRH40370	Soybean	cytosol	33.44	27.64
KRH60813	Soybean	cytosol, plastid	33.11	27.52
Solyc09g091530.1.1	Tomato	cytosol	32.46	27.5
KRH65522	Soybean	cytosol	33.77	27.47
CDY69068	Canola	cytosol	35.08	27.44
Solyc01g081340.2.1	Tomato	cytosol	32.46	27.42
PGSC0003DMT400076187	Potato	cytosol	32.46	27.27
KRH40367	Soybean	cytosol	28.85	27.24
Bra001405.1-P	Field mustard	cytosol	34.1	27.15
CDY08520	Canola	cytosol	34.1	27.15
Solyc01g080990.2.1	Tomato	cytosol	31.48	27.04
AT3G11480.1	Thale cress	cytosol	33.44	26.91
Bra034836.1-P	Field mustard	cytosol	33.77	26.89
CDX73874	Canola	cytosol	33.77	26.89
KRH40363	Soybean	cytosol	31.8	26.8
KRH00866	Soybean	cytosol	32.79	26.74
Bra036847.1-P	Field mustard	cytosol	23.61	26.67
CDX70230	Canola	cytosol, plastid	34.43	26.65
Bra036601.1-P	Field mustard	cytosol	34.1	26.6
CDY19749	Canola	cytosol	34.1	26.53
CDY44849	Canola	cytosol	34.1	26.53
CDX87021	Canola	cytosol	33.77	26.28
AT5G04380.3	Thale cress	cytosol	33.44	26.22
CDY08522	Canola	cytosol	23.61	26.18
AT2G14060.1	Thale cress	cytosol	31.8	26.08
Bra009460.1-P	Field mustard	cytosol	33.11	25.77
CDX70231	Canola	cytosol	33.11	25.77
CDX70229	Canola	cytosol	33.11	25.7
CDY54689	Canola	cytosol	27.21	25.7
CDY47999	Canola	cytosol	33.11	25.63
KRH00870	Soybean	cytosol, mitochondrion, nucleus, plastid	31.8	25.53
CDY51318	Canola	plastid	32.13	25.26
AT3G21950.2	Thale cress	cytosol	33.11	25.25
AT5G04370.2	Thale cress	cytosol	34.1	25.06
CDX73768	Canola	cytosol	32.46	24.15
CDY67082	Canola	cytosol, plastid	20.98	23.97
PGSC0003DMT400004564	Potato	cytosol, mitochondrion, nucleus	17.38	23.25
KRH00867	Soybean	cytosol	32.13	21.97
Bra005802.1-P	Field mustard	cytosol	34.1	21.1
CDY11287	Canola	cytosol	34.1	21.1
VIT_12s0057g01060.t01	Wine grape	cytosol	32.13	17.85
CDY51317	Canola	mitochondrion	34.43	13.36

Protein Annotations

EnsemblPlants:TraesCSU01G225900.1	EnsemblPlantsGene:TraesCSU01G225900	Gene3D:1.10.1200.270	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:MeTrfase_7	InterPro:SAM-dependent_MTases
PANTHER:PTHR31009	PANTHER:PTHR31009:SF39	PFAM:PF03492	SUPFAM:SSF53335	MapMan:50.2.1	:

Description

No Description!

Coordinates

chrUn:-:334500140..334501241

Molecular Weight (calculated)

34240.2 Da

IEP (calculated)

6.744

GRAVY (calculated)

-0.128

Length

305 amino acids

Sequence
(BLAST)

001: MVIADLGCSS GPNALTLVST AVEAIMSHSL QFQHPPPEVS VLLNDLPHND FNMVVKSLVT LRQSNNKFVL VTGVTPGSFY ERLFTSDSMH LICSSNNLHL
101: LSKAPEDLSR NHIPAYDTDE HARHERLRMV RKAYARQFRK DFTLFLKLRD KELVPGGRMV LSLVGRCSDV IASNFFHIWE TAAQILGVIA SKGVIAKEKF
201: DSFYIPMYGP SAEELKEIIE EQSPFSIRDM RVYDPRADMD RALFTPSWSA KQKGAIFEPI IVEHFGAVMD EFERVTERRL SLEGGMQGDH ARTSRAVLAV
301: SLAEA

Best Arabidopsis Sequence Match ( AT5G04370.1 )
(BLAST)

001: MDSRFTDSTT TLRCNGKSEN ERKNGDEERI SKYSFVSPLC MRGGDGYNSY SSNSLLQRRV LSKAKPVLVK NTKDLMINLN FPTYIKVADL GCSSGQNTFL
101: AMSEIINTIN VFCQQRNQNP PEIDCCLNDL PSNDFNTTFK FIQFFNGMNI TSKESYFVYG VPGSFYSRLF PRRSLHFVHS SYGLHWLSKV PEGLEKNKMS
201: VYITNSSPLS TYKAYLNQFQ RDFATFLKLR SEEMVSNGRM VLTFIGRNTI DNPLHRDCCH FWTLLSKSLR DLVAEGLVSA SKVDSFYLPF YDPNEKEIKE
301: MVQKEGSFEI RDLETHGYDL GHCNQDESKR SKSGQNEANY IRAVSEPLLA AHFGDAIINI LFNKFACHVS QHVSCRNKTT VSIVVSLTKK KTFLMS

Arabidopsis Description

NAMT1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WL44]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.