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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • peroxisome 2
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:peroxisome
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:peroxisome
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER98034 Sorghum cytosol 77.11 82.67
KXG36222 Sorghum cytosol 72.64 78.92
KXG29440 Sorghum cytosol 57.96 63.14
KXG29438 Sorghum cytosol 53.98 59.78
HORVU7Hr1G040170.1 Barley cytosol 51.24 57.87
KXG19696 Sorghum cytosol 50.75 53.12
OQU76154 Sorghum cytosol 54.73 53.01
GSMUA_Achr10P... Banana cytosol 45.02 48.53
GSMUA_Achr7P20290_001 Banana cytosol 44.03 47.33
GSMUA_Achr7P20280_001 Banana cytosol 43.53 46.79
EES15454 Sorghum cytosol 45.52 45.64
GSMUA_Achr7P20400_001 Banana cytosol 22.89 45.54
GSMUA_Achr7P20380_001 Banana cytosol 41.79 45.28
GSMUA_Achr7P20390_001 Banana cytosol 28.36 44.71
GSMUA_AchrUn_... Banana cytosol 41.54 44.41
GSMUA_Achr7P20410_001 Banana cytosol 41.04 44.24
GSMUA_Achr7P20420_001 Banana cytosol 40.55 44.17
Solyc01g080970.2.1 Tomato cytosol 35.32 44.1
GSMUA_Achr7P20300_001 Banana cytosol 45.02 42.79
Solyc01g080990.2.1 Tomato cytosol 37.56 42.54
PGSC0003DMT400004581 Potato cytosol 38.31 42.08
VIT_04s0023g02200.t01 Wine grape cytosol 37.31 41.9
VIT_04s0023g02290.t01 Wine grape cytosol 32.09 41.48
PGSC0003DMT400004564 Potato cytosol, mitochondrion, nucleus 23.38 41.23
VIT_04s0023g02230.t01 Wine grape cytosol 35.82 40.56
KRH76742 Soybean cytosol 26.87 40.45
KRH08182 Soybean cytosol, mitochondrion, plastid 36.82 40.0
KRH69876 Soybean cytosol 36.57 39.73
CDY58433 Canola cytosol 31.09 39.68
VIT_04s0023g02240.t01 Wine grape cytosol 35.82 39.67
Solyc09g091550.2.1 Tomato cytosol 35.57 39.61
KRH08181 Soybean cytosol 34.08 39.6
KRH08180 Soybean cytosol 36.32 39.46
OQU88585 Sorghum plastid 44.78 39.39
Solyc09g091540.1.1 Tomato cytosol 35.32 38.9
VIT_04s0023g02280.t01 Wine grape cytosol 31.59 38.84
KRH08183 Soybean cytosol 35.57 38.65
Solyc09g091530.1.1 Tomato cytosol 34.58 38.61
GSMUA_AchrUn_... Banana cytosol 42.29 38.55
PGSC0003DMT400049166 Potato cytosol 33.83 38.42
CDX77965 Canola cytosol 24.13 37.74
PGSC0003DMT400076187 Potato cytosol 34.08 37.74
VIT_04s0023g02310.t01 Wine grape cytosol 34.08 37.64
KRH65522 Soybean cytosol 34.83 37.33
Solyc04g055260.2.1 Tomato nucleus 33.83 37.26
VIT_04s0023g02220.t01 Wine grape cytosol 32.84 37.18
Solyc10g061840.1.1 Tomato cytosol 32.59 37.01
KRH69871 Soybean cytosol 34.33 37.0
CDY44851 Canola cytosol 25.37 36.96
KRH08176 Soybean cytosol 33.33 36.91
VIT_04s0023g02260.t01 Wine grape plastid 22.39 36.73
KRH40363 Soybean cytosol 32.84 36.46
EES03488 Sorghum cytosol 34.83 36.27
Bra009458.1-P Field mustard cytosol 28.61 36.05
Bra034838.1-P Field mustard cytosol 31.09 36.02
Solyc01g081340.2.1 Tomato cytosol 32.34 36.01
KRH60813 Soybean cytosol, plastid 32.84 35.97
Bra036847.1-P Field mustard cytosol 24.13 35.93
AT5G38020.1 Thale cress cytosol 32.59 35.6
KRH00866 Soybean cytosol 33.08 35.56
CDY23695 Canola endoplasmic reticulum 19.9 35.4
Bra009459.1-P Field mustard cytosol 29.1 35.35
CDY65325 Canola cytosol 30.85 35.33
KRH62438 Soybean cytosol, mitochondrion, peroxisome 22.64 35.27
CDY69068 Canola cytosol 34.08 35.13
AT2G14060.1 Thale cress cytosol 32.09 34.68
AT3G11480.1 Thale cress cytosol 32.59 34.56
KRH00865 Soybean cytosol 31.59 34.42
CDY27054 Canola cytosol 24.63 34.38
CDY08522 Canola cytosol 23.38 34.18
Bra030012.1-P Field mustard cytosol 30.85 34.16
CDX83129 Canola cytosol 30.85 34.16
AT5G66430.1 Thale cress cytosol 29.85 33.9
CDY01018 Canola endoplasmic reticulum 20.15 33.75
Bra022603.1-P Field mustard cytosol 24.13 33.68
AT5G04370.2 Thale cress cytosol 34.33 33.25
CDY44848 Canola cytosol 23.88 33.1
CDY19749 Canola cytosol 32.09 32.91
CDY44849 Canola cytosol 32.09 32.91
KRH40370 Soybean cytosol 30.1 32.79
KXG19297 Sorghum cytosol 29.85 32.7
Bra009460.1-P Field mustard cytosol 31.84 32.65
CDX70231 Canola cytosol 31.84 32.65
CDX87021 Canola cytosol 31.84 32.65
CDY08520 Canola cytosol 31.09 32.64
KXG29202 Sorghum cytosol 30.1 32.61
Bra036601.1-P Field mustard cytosol 31.59 32.48
CDY51318 Canola plastid 31.34 32.47
Bra034836.1-P Field mustard cytosol 30.85 32.38
KRH00870 Soybean cytosol, mitochondrion, nucleus, plastid 30.6 32.37
OQU76323 Sorghum cytosol 29.1 32.32
CDY47999 Canola cytosol 31.59 32.23
KXG19886 Sorghum cytosol 28.86 32.13
CDY01022 Canola cytosol 23.13 31.96
CDX70232 Canola cytosol, plastid 29.85 31.91
CDX70229 Canola cytosol 31.09 31.81
CDX70230 Canola cytosol, plastid 31.09 31.73
AT5G04380.3 Thale cress cytosol 30.6 31.62
Bra001405.1-P Field mustard cytosol 30.1 31.59
CDX73874 Canola cytosol 30.1 31.59
CDX73768 Canola cytosol 31.84 31.22
CDY54689 Canola cytosol 24.88 30.96
AT3G21950.2 Thale cress cytosol 30.6 30.75
EER88049 Sorghum cytosol 27.36 30.73
KRH40367 Soybean cytosol 24.63 30.65
OQU86548 Sorghum cytosol 27.11 28.76
Bra005802.1-P Field mustard cytosol 34.58 28.19
CDY11287 Canola cytosol 34.58 28.19
OQU86546 Sorghum cytosol 27.36 28.06
EES18827 Sorghum cytosol 27.11 27.88
KRH00867 Soybean cytosol 30.85 27.8
KXG19154 Sorghum plastid 25.62 26.61
CDY67082 Canola cytosol, plastid 17.16 25.84
VIT_12s0057g01060.t01 Wine grape cytosol 33.83 24.77
CDY51317 Canola mitochondrion 29.85 15.27
Protein Annotations
EnsemblPlants:OQU88491EnsemblPlantsGene:SORBI_3002G044700Gene3D:1.10.1200.270Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016740GO:GO:0032259InterPro:MeTrfase_7
InterPro:SAM-dependent_MTasesPANTHER:PTHR31009PANTHER:PTHR31009:SF22PFAM:PF03492ProteinID:OQU88491ProteinID:OQU88491.1
SUPFAM:SSF53335UniParc:UPI0009DC89DAUniProt:A0A1W0W2B1MapMan:50.2.1::
Description
hypothetical protein
Coordinates
chr2:-:4224615..4227621
Molecular Weight (calculated)
45849.6 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.162
Length
402 amino acids
Sequence
(BLAST)
001: MKSIQIHWVL SLFLLNNQET IPTKFLVMMT NLQRDFHMAE GNGEHSYAKN SRAQEKLMVQ TTPIVEDAIK EVCTALVPKT MVIADLGCSS GPNTLLFISN
101: VINIIAGQCN KSIGECDPVE LQIFLNDLPG NDFNQLFSSL ENLKHGKIIE QMGYTPPLYY ISGLPKSYYN RLFPRRSVHL FHSACCLHWR SQVPEELHAR
201: NGTPLNKDNI YITKTTPSSV VKCFQEQFNK DFSLFLKLRH EELVYGGKMV LTFVGRKDED VYNGDMNQLY GLLARSLQSL VAKGLVEKER LEAFYLPLYG
301: PSIAEVKEIV MESHMFKLDY IKLLELSWDP YDDTESDDVQ DNIRSGINVS KFVRALLEPL IASHFGDTIP KLLFEEYACL MSKHLEQGKQ KSSFIVMSLN
401: KL
Best Arabidopsis Sequence Match ( AT3G11480.1 )
(BLAST)
001: MDPRFINTIP SLRYDDDKCD DEYAFVKALC MSGGDGANSY SANSRLQKKV LSMAKPVLVR NTEEMMMNLD FPTYIKVAEL GCSSGQNSFL AIFEIINTIN
101: VLCQHVNKNS PEIDCCLNDL PENDFNTTFK FVPFFNKELM ITNKSSCFVY GAPGSFYSRL FSRNSLHLIH SSYALHWLSK VPEKLENNKG NLYITSSSPQ
201: SAYKAYLNQF QKDFTMFLRL RSEEIVSNGR MVLTFIGRNT LNDPLYRDCC HFWTLLSNSL RDLVFEGLVS ESKLDAFNMP FYDPNVQELK EVIQKEGSFE
301: INELESHGFD LGHYYEEDDF EAGRNEANGI RAVSEPMLIA HFGEEIIDTL FDKYAYHVTQ HANCRNKTTV SLVVSLTKK
Arabidopsis Description
BSMT1Salicylate/benzoate carboxyl methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q6XMI3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.