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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d044762_P001 Maize cytosol 81.45 88.48
Zm00001d044765_P001 Maize cytosol 81.45 87.34
Zm00001d044763_P001 Maize cytosol 78.55 86.02
KXG36222 Sorghum cytosol 51.57 57.84
EER98034 Sorghum cytosol 51.81 57.33
KXG29438 Sorghum cytosol 50.12 57.3
KXG19696 Sorghum cytosol 52.77 57.03
KXG29440 Sorghum cytosol 50.36 56.64
OQU88491 Sorghum extracellular 53.01 54.73
GSMUA_Achr7P20290_001 Banana cytosol 44.58 49.47
GSMUA_Achr10P... Banana cytosol 44.34 49.33
GSMUA_Achr7P20280_001 Banana cytosol 44.34 49.2
EES15454 Sorghum cytosol 47.23 48.88
GSMUA_AchrUn_... Banana cytosol 43.37 47.87
GSMUA_Achr7P20410_001 Banana cytosol 41.93 46.65
GSMUA_Achr7P20380_001 Banana cytosol 41.2 46.09
GSMUA_Achr7P20400_001 Banana cytosol 22.17 45.54
GSMUA_Achr7P20390_001 Banana cytosol 27.95 45.49
GSMUA_Achr7P20420_001 Banana cytosol 39.52 44.44
GSMUA_Achr7P20300_001 Banana cytosol 44.82 43.97
VIT_04s0023g02200.t01 Wine grape cytosol 37.35 43.3
Solyc01g080970.2.1 Tomato cytosol 33.49 43.17
VIT_04s0023g02230.t01 Wine grape cytosol 36.87 43.1
Solyc01g080990.2.1 Tomato cytosol 36.39 42.54
OQU88585 Sorghum plastid 46.75 42.45
VIT_04s0023g02240.t01 Wine grape cytosol 37.11 42.42
PGSC0003DMT400004564 Potato cytosol, mitochondrion, nucleus 23.13 42.11
VIT_04s0023g02260.t01 Wine grape plastid 24.82 42.04
KRH08180 Soybean cytosol 37.35 41.89
KRH69876 Soybean cytosol 36.87 41.35
CDY58433 Canola cytosol 31.33 41.27
VIT_04s0023g02310.t01 Wine grape cytosol 36.14 41.21
KRH08183 Soybean cytosol 36.39 40.81
KRH08181 Soybean cytosol 33.98 40.75
Solyc09g091550.2.1 Tomato cytosol 35.42 40.72
PGSC0003DMT400004581 Potato cytosol 35.9 40.71
VIT_04s0023g02280.t01 Wine grape cytosol 32.05 40.67
KRH08182 Soybean cytosol, mitochondrion, plastid 36.14 40.54
VIT_04s0023g02290.t01 Wine grape cytosol 30.36 40.51
KRH76742 Soybean cytosol 26.02 40.45
Solyc09g091530.1.1 Tomato cytosol 34.7 40.0
GSMUA_AchrUn_... Banana cytosol 41.69 39.23
Solyc09g091540.1.1 Tomato cytosol 34.46 39.18
VIT_04s0023g02220.t01 Wine grape cytosol 33.49 39.15
KRH69871 Soybean cytosol 35.18 39.14
PGSC0003DMT400076187 Potato cytosol 34.22 39.12
CDY44851 Canola cytosol 25.78 38.77
Solyc04g055260.2.1 Tomato nucleus 33.98 38.63
CDY23695 Canola endoplasmic reticulum 20.96 38.5
KRH65522 Soybean cytosol 34.7 38.4
KRH08176 Soybean cytosol 33.49 38.29
Bra034838.1-P Field mustard cytosol 31.81 38.04
CDY44848 Canola cytosol 26.51 37.93
KRH62438 Soybean cytosol, mitochondrion, peroxisome 23.13 37.21
CDY69068 Canola cytosol 34.94 37.18
CDY65325 Canola cytosol 31.33 37.04
Bra009458.1-P Field mustard cytosol 28.43 36.99
AT3G11480.1 Thale cress cytosol 33.73 36.94
Bra009459.1-P Field mustard cytosol 29.4 36.86
KRH60813 Soybean cytosol, plastid 32.53 36.78
KRH40363 Soybean cytosol 32.05 36.74
AT5G66430.1 Thale cress cytosol 31.33 36.72
CDX77965 Canola cytosol 22.65 36.58
PGSC0003DMT400049166 Potato cytosol 31.08 36.44
KRH00866 Soybean cytosol 32.77 36.36
Solyc10g061840.1.1 Tomato cytosol 30.84 36.16
CDY08522 Canola cytosol 23.86 36.0
CDY01018 Canola endoplasmic reticulum 20.72 35.83
KRH00865 Soybean cytosol 31.81 35.77
Bra001405.1-P Field mustard cytosol 33.01 35.77
CDX73874 Canola cytosol 33.01 35.77
Bra036847.1-P Field mustard cytosol 23.13 35.56
CDY08520 Canola cytosol 32.77 35.51
KRH40370 Soybean cytosol 31.57 35.5
Solyc01g081340.2.1 Tomato cytosol 30.84 35.46
CDY27054 Canola cytosol 24.58 35.42
OQU76323 Sorghum cytosol 30.84 35.36
Bra036601.1-P Field mustard cytosol 33.25 35.29
Bra034836.1-P Field mustard cytosol 32.53 35.25
Bra022603.1-P Field mustard cytosol 24.34 35.07
EES03488 Sorghum cytosol 32.53 34.97
CDX87021 Canola cytosol 33.01 34.95
CDY19749 Canola cytosol 33.01 34.95
KXG19886 Sorghum cytosol 30.36 34.9
Bra009460.1-P Field mustard cytosol 32.77 34.69
CDX70231 Canola cytosol 32.77 34.69
CDY44849 Canola cytosol 32.53 34.44
AT5G38020.1 Thale cress cytosol 30.36 34.24
CDX70229 Canola cytosol 32.29 34.1
CDY51318 Canola plastid 31.81 34.02
CDY47999 Canola cytosol 32.05 33.76
AT5G04370.2 Thale cress cytosol 33.73 33.73
CDX70230 Canola cytosol, plastid 31.81 33.5
KRH00870 Soybean cytosol, mitochondrion, nucleus, plastid 30.6 33.42
EER88049 Sorghum cytosol 28.67 33.24
KXG29202 Sorghum cytosol 29.64 33.15
AT2G14060.1 Thale cress cytosol 29.64 33.06
Bra030012.1-P Field mustard cytosol 28.92 33.06
CDX83129 Canola cytosol 28.92 33.06
CDX70232 Canola cytosol, plastid 29.88 32.98
AT5G04380.3 Thale cress cytosol 30.6 32.65
KRH40367 Soybean cytosol 25.06 32.2
CDY01022 Canola cytosol 22.41 31.96
KXG19297 Sorghum cytosol 28.19 31.88
AT3G21950.2 Thale cress cytosol 30.6 31.75
CDX73768 Canola cytosol 30.84 31.22
CDY54689 Canola cytosol 24.1 30.96
Bra005802.1-P Field mustard cytosol 34.94 29.41
CDY11287 Canola cytosol 34.94 29.41
OQU86548 Sorghum cytosol 26.51 29.02
KRH00867 Soybean cytosol 30.84 28.7
CDY67082 Canola cytosol, plastid 18.31 28.46
EES18827 Sorghum cytosol 26.51 28.13
KXG19154 Sorghum plastid 25.78 27.65
OQU86546 Sorghum cytosol 26.02 27.55
VIT_12s0057g01060.t01 Wine grape cytosol 30.84 23.32
CDY51317 Canola mitochondrion 30.6 16.16
Protein Annotations
Gene3D:1.10.1200.270Gene3D:3.40.50.150MapMan:50.2.1EntrezGene:8065709UniProt:A0A1W0VSC8GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016740GO:GO:0032259
InterPro:MeTrfase_7EnsemblPlants:OQU76154ProteinID:OQU76154ProteinID:OQU76154.1PFAM:PF03492PANTHER:PTHR31009
PANTHER:PTHR31009:SF24InterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3010G100300SUPFAM:SSF53335unigene:Sbi.21583UniParc:UPI0009DC8547
Description
hypothetical protein
Coordinates
chr10:+:9148528..9158826
Molecular Weight (calculated)
47423.3 Da
IEP (calculated)
7.673
GRAVY (calculated)
-0.364
Length
415 amino acids
Sequence
(BLAST)
001: MPMRIERDLH MATGNGETSY TKNSRIQLKP QLAAMPMRIE RDLHMATGNG ETSYTKNSRI QEKAMFHMKP VLEEATREVY TALLPKTMVV ADLGCSSGPN
101: TLRFVSEVIG IIARHCKELD DRRHDRPPQL QFFLNDLPGN DFNNLFQLIQ QFHKSTARKH KGEAEEALPP CYITGLPGSY YTRIFPSESV HLFHSLFCLQ
201: WRSQAPEQLK GTKKTCLDIY ITKTMSPSMV KLFQQQFQKD FSLFLKLRYE ELVSGGQMVL TFIGRKHEDV LTGESNHLYG LLAQSLKSLV DEGLVDKEKL
301: ESFYLPMYSP SVGEVEAIVK QVGLFNMNHV KVFEINWDPY DDSEESDVVR NSIRSGENVA KCLRAVMEPL VASQFGEAIL DKLFEEYARR VAKHLENEKT
401: KHAVLVLSMK KAIHV
Best Arabidopsis Sequence Match ( AT5G04370.1 )
(BLAST)
001: MDSRFTDSTT TLRCNGKSEN ERKNGDEERI SKYSFVSPLC MRGGDGYNSY SSNSLLQRRV LSKAKPVLVK NTKDLMINLN FPTYIKVADL GCSSGQNTFL
101: AMSEIINTIN VFCQQRNQNP PEIDCCLNDL PSNDFNTTFK FIQFFNGMNI TSKESYFVYG VPGSFYSRLF PRRSLHFVHS SYGLHWLSKV PEGLEKNKMS
201: VYITNSSPLS TYKAYLNQFQ RDFATFLKLR SEEMVSNGRM VLTFIGRNTI DNPLHRDCCH FWTLLSKSLR DLVAEGLVSA SKVDSFYLPF YDPNEKEIKE
301: MVQKEGSFEI RDLETHGYDL GHCNQDESKR SKSGQNEANY IRAVSEPLLA AHFGDAIINI LFNKFACHVS QHVSCRNKTT VSIVVSLTKK KTFLMS
Arabidopsis Description
NAMT1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WL44]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.