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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG19297 Sorghum cytosol 51.21 51.77
OQU76323 Sorghum cytosol 49.33 50.55
EER88049 Sorghum cytosol 48.25 50.0
KXG19886 Sorghum cytosol 48.52 49.86
KRH76742 Soybean cytosol 28.84 40.07
VIT_04s0023g02290.t01 Wine grape cytosol 32.34 38.59
KRH69876 Soybean cytosol 38.27 38.38
KRH08182 Soybean cytosol, mitochondrion, plastid 38.01 38.11
VIT_04s0023g02230.t01 Wine grape cytosol 36.39 38.03
VIT_04s0023g02280.t01 Wine grape cytosol 33.42 37.92
KXG19154 Sorghum plastid 39.35 37.73
KRH08180 Soybean cytosol 37.47 37.57
KRH08176 Soybean cytosol 36.66 37.47
VIT_04s0023g02240.t01 Wine grape cytosol 36.66 37.47
KRH08181 Soybean cytosol 34.5 36.99
VIT_04s0023g02220.t01 Wine grape cytosol 35.31 36.9
KRH69871 Soybean cytosol 36.93 36.73
KRH08183 Soybean cytosol 36.12 36.22
VIT_04s0023g02310.t01 Wine grape cytosol 35.31 35.99
PGSC0003DMT400049166 Potato cytosol 33.15 34.75
Solyc09g091540.1.1 Tomato cytosol 33.69 34.25
KXG36222 Sorghum cytosol 33.96 34.05
Bra034838.1-P Field mustard cytosol 31.81 34.01
CDY65325 Canola cytosol 32.08 33.9
EER98034 Sorghum cytosol 34.23 33.87
Solyc01g081340.2.1 Tomato cytosol 32.88 33.8
Solyc09g091530.1.1 Tomato cytosol 32.61 33.61
PGSC0003DMT400004581 Potato cytosol 33.15 33.61
VIT_04s0023g02260.t01 Wine grape plastid 22.1 33.47
KXG19696 Sorghum cytosol 34.5 33.33
PGSC0003DMT400076187 Potato cytosol 32.61 33.33
KRH60813 Soybean cytosol, plastid 32.88 33.24
Solyc01g080990.2.1 Tomato cytosol 31.81 33.24
Solyc01g080970.2.1 Tomato cytosol 28.84 33.23
Bra009458.1-P Field mustard cytosol 28.57 33.23
KRH40363 Soybean cytosol 32.34 33.15
KRH00865 Soybean cytosol 32.88 33.06
CDY58433 Canola cytosol 28.03 33.02
Solyc09g091550.2.1 Tomato cytosol 32.08 32.96
AT5G66430.1 Thale cress cytosol 31.27 32.77
VIT_04s0023g02200.t01 Wine grape cytosol 31.54 32.68
KRH00866 Soybean cytosol 32.88 32.62
AT5G38020.1 Thale cress cytosol 32.34 32.61
Solyc04g055260.2.1 Tomato nucleus 32.08 32.6
Bra030012.1-P Field mustard cytosol 31.81 32.51
CDX83129 Canola cytosol 31.81 32.51
EES03488 Sorghum cytosol 33.69 32.38
Bra009459.1-P Field mustard cytosol 28.57 32.02
Solyc10g061840.1.1 Tomato cytosol 29.92 31.36
CDY27054 Canola cytosol 24.26 31.25
KXG29440 Sorghum cytosol 31.0 31.17
KXG29438 Sorghum cytosol 30.46 31.13
CDX77965 Canola cytosol 21.56 31.13
CDY44849 Canola cytosol 32.88 31.12
KRH00870 Soybean cytosol, mitochondrion, nucleus, plastid 31.81 31.05
CDY69068 Canola cytosol 32.61 31.03
CDY01022 Canola cytosol 24.26 30.93
CDY08520 Canola cytosol 31.81 30.81
CDY44851 Canola cytosol 22.91 30.8
KRH40370 Soybean cytosol 30.46 30.62
Bra009460.1-P Field mustard cytosol 32.34 30.61
CDX70231 Canola cytosol 32.34 30.61
Bra034836.1-P Field mustard cytosol 31.54 30.55
CDY08522 Canola cytosol 22.64 30.55
EES18827 Sorghum cytosol 32.08 30.43
OQU86548 Sorghum cytosol 31.0 30.34
CDX70229 Canola cytosol 32.08 30.28
AT3G21950.2 Thale cress cytosol 32.61 30.25
Bra022603.1-P Field mustard cytosol 23.45 30.21
CDY47999 Canola cytosol 32.08 30.2
CDY51318 Canola plastid 31.54 30.15
AT2G14060.1 Thale cress cytosol 30.19 30.11
CDY19749 Canola cytosol 31.81 30.1
OQU88491 Sorghum extracellular 32.61 30.1
CDY23695 Canola endoplasmic reticulum 18.33 30.09
Bra001405.1-P Field mustard cytosol 31.0 30.03
CDX73874 Canola cytosol 31.0 30.03
Bra036847.1-P Field mustard cytosol 21.83 30.0
KRH65522 Soybean cytosol 30.19 29.87
CDX87021 Canola cytosol 31.54 29.85
KRH62438 Soybean cytosol, mitochondrion, peroxisome 20.75 29.84
AT3G11480.1 Thale cress cytosol 30.46 29.82
Bra036601.1-P Field mustard cytosol 31.27 29.67
CDY44848 Canola cytosol 23.18 29.66
OQU76154 Sorghum cytosol 33.15 29.64
OQU86546 Sorghum cytosol 31.27 29.59
AT5G04380.3 Thale cress cytosol 30.73 29.31
CDX70230 Canola cytosol, plastid 31.0 29.19
EES15454 Sorghum cytosol 31.27 28.93
CDY01018 Canola endoplasmic reticulum 18.6 28.75
CDX70232 Canola cytosol, plastid 29.11 28.72
CDY54689 Canola cytosol 24.8 28.48
PGSC0003DMT400004564 Potato cytosol, mitochondrion, nucleus 17.25 28.07
KRH40367 Soybean cytosol 24.26 27.86
CDX73768 Canola cytosol 30.46 27.56
AT5G04370.2 Thale cress cytosol 30.73 27.47
KRH00867 Soybean cytosol 31.54 26.23
OQU88585 Sorghum plastid 30.73 24.95
Bra005802.1-P Field mustard cytosol 32.08 24.14
CDY11287 Canola cytosol 32.08 24.14
CDY67082 Canola cytosol, plastid 17.25 23.97
VIT_12s0057g01060.t01 Wine grape cytosol 33.42 22.59
CDY51317 Canola mitochondrion 30.46 14.38
Protein Annotations
EnsemblPlants:KXG29202EnsemblPlantsGene:SORBI_3005G226200Gene3D:1.10.1200.270Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016740GO:GO:0032259InterPro:MeTrfase_7
InterPro:SAM-dependent_MTasesPANTHER:PTHR31009PANTHER:PTHR31009:SF12PFAM:PF03492ProteinID:KXG29202ProteinID:KXG29202.1
SEG:segSUPFAM:SSF53335UniParc:UPI00081AD17BUniProt:A0A1B6PU57MapMan:50.2.1:
Description
hypothetical protein
Coordinates
chr5:+:71318390..71321095
Molecular Weight (calculated)
41422.8 Da
IEP (calculated)
5.655
GRAVY (calculated)
-0.244
Length
371 amino acids
Sequence
(BLAST)
001: MDAQQTVRMN PGEGETSYAR NSTFQSAEQM RMKPQIEEAI MELCGNSTPL PRSMVIADLG CSCGPNALTM VSAAVDAIHR QCLELQQPPP ELSLLLNDLP
101: SNDFNTTIKH LVEFQERKNI DKGQHGFSPF VMTSIVPGSF YGRLFTTGSV HLVLSSNSLH WLSKVPEDLL KNGIPMYHSD EQLRRKTWPV VLDAYAQQFR
201: KDLLWFLECR AQEMVPGGRL IVSLTGTQSP ATASNGSAQQ MLEFIARILD DMASRGVLDK QKLKAFYIPL YSPSEKEVKE IIEEQGSFSI NKLQVHDPIA
301: GVNKAMISPK IKAYALRAAI EPIILDHFGS SEDLMDEFTN TAEKFNSQAL LQNELTKNPM VFLALSLERQ S
Best Arabidopsis Sequence Match ( AT1G19640.1 )
(BLAST)
001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG
Arabidopsis Description
JMTJasmonate O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9AR07]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.