Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011685.1-P | Field mustard | cytosol | 80.05 | 82.73 |
| Bra017763.1-P | Field mustard | cytosol, mitochondrion, plastid | 80.05 | 82.73 |
| CDX69227 | Canola | cytosol | 82.21 | 82.43 |
| CDX75578 | Canola | cytosol | 82.21 | 82.43 |
| Bra010556.1-P | Field mustard | cytosol, mitochondrion, nucleus | 77.36 | 79.94 |
| CDY64928 | Canola | cytosol | 57.41 | 79.78 |
| CDY71401 | Canola | cytosol | 57.14 | 79.4 |
| CDY24787 | Canola | cytosol | 67.39 | 79.37 |
| CDY24788 | Canola | cytosol | 77.63 | 79.34 |
| Bra010356.1-P | Field mustard | cytosol | 74.93 | 78.75 |
| CDY53070 | Canola | cytosol | 71.7 | 78.01 |
| CDY14232 | Canola | cytosol | 66.85 | 77.99 |
| Bra010555.1-P | Field mustard | endoplasmic reticulum, extracellular, plastid | 61.19 | 72.52 |
| CDY53071 | Canola | cytosol | 60.92 | 72.2 |
| VIT_04s0023g02170.t01 | Wine grape | cytosol | 62.8 | 64.36 |
| KRH75102 | Soybean | cytosol | 61.73 | 62.91 |
| KRH70961 | Soybean | cytosol | 61.46 | 62.64 |
| PGSC0003DMT400009296 | Potato | cytosol | 57.95 | 58.42 |
| Solyc02g084950.2.1 | Tomato | cytosol | 57.68 | 57.84 |
| TraesCS3B01G287100.1 | Wheat | plastid | 45.82 | 44.85 |
| HORVU3Hr1G065790.1 | Barley | cytosol, nucleus, peroxisome | 45.28 | 44.33 |
| Os01t0701700-01 | Rice | extracellular | 45.01 | 44.06 |
| TraesCS3A01G255100.1 | Wheat | cytosol | 45.01 | 44.06 |
| TraesCS3D01G256000.1 | Wheat | cytosol | 45.01 | 44.06 |
| EES03488 | Sorghum | cytosol | 45.82 | 44.04 |
| Zm00001d043734_P001 | Maize | cytosol | 45.01 | 43.95 |
| HORVU3Hr1G013850.1 | Barley | cytosol | 43.13 | 43.24 |
| GSMUA_Achr2P06560_001 | Banana | cytosol | 42.32 | 42.78 |
| AT5G66430.1 | Thale cress | cytosol | 38.27 | 40.11 |
| AT3G11480.1 | Thale cress | cytosol | 40.16 | 39.31 |
| GSMUA_Achr1P25310_001 | Banana | cytosol | 41.78 | 37.71 |
| AT5G38020.1 | Thale cress | cytosol | 37.2 | 37.5 |
| AT1G19640.1 | Thale cress | cytosol | 38.27 | 36.5 |
| AT5G04380.3 | Thale cress | cytosol | 38.01 | 36.25 |
| GSMUA_Achr1P12690_001 | Banana | plastid | 43.94 | 36.06 |
| AT5G04370.2 | Thale cress | cytosol | 38.27 | 34.22 |
| AT3G21950.2 | Thale cress | cytosol | 36.12 | 33.5 |
| AT2G14060.1 | Thale cress | cytosol | 32.61 | 32.53 |
| Zm00001d039695_P001 | Maize | cytosol | 42.86 | 26.86 |
Protein Annotations
| Gene3D:1.10.1200.270 | Gene3D:3.40.50.150 | MapMan:50.2.1 | EntrezGene:829799 | ProteinID:AEE86659.1 | EMBL:AK226652 |
| ArrayExpress:AT4G36470 | EnsemblPlantsGene:AT4G36470 | RefSeq:AT4G36470 | TAIR:AT4G36470 | RefSeq:AT4G36470-TAIR-G | EnsemblPlants:AT4G36470.1 |
| TAIR:AT4G36470.1 | EMBL:BT014888 | ProteinID:CAB16845.1 | ProteinID:CAB80313.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 | GO:GO:0016740 | GO:GO:0032259 |
| InterPro:MeTrfase_7 | RefSeq:NP_195365.1 | UniProt:O23234 | PFAM:PF03492 | PO:PO:0000293 | PO:PO:0007611 |
| PO:PO:0009031 | PO:PO:0020100 | PO:PO:0025022 | PANTHER:PTHR31009 | PANTHER:PTHR31009:SF9 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | UniParc:UPI000009ED5B | : | : | : | : |
Description
At4g36470 [Source:UniProtKB/TrEMBL;Acc:O23234]
Coordinates
chr4:-:17214766..17216530
Molecular Weight (calculated)
41986.9 Da
IEP (calculated)
5.340
GRAVY (calculated)
-0.388
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.