Factsheet for TraesCS3B01G287100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22736107

msms PMID: 22736107 doi

AH Kamal, K Cho, DE Kim, N Uozumi, KY Chung, SY Lee, JS Choi, SW Cho, CS Shin, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G065790.1	Barley	cytosol, nucleus, peroxisome	98.68	98.68
TraesCS3D01G256000.1	Wheat	cytosol	98.15	98.15
TraesCS3A01G255100.1	Wheat	cytosol	97.89	97.89
Os01t0701700-01	Rice	extracellular	87.34	87.34
EES03488	Sorghum	cytosol	88.65	87.05
Zm00001d043734_P001	Maize	cytosol	86.28	86.05
GSMUA_Achr2P06560_001	Banana	cytosol	55.67	57.49
VIT_04s0023g02170.t01	Wine grape	cytosol	49.87	52.21
GSMUA_Achr1P25310_001	Banana	cytosol	55.94	51.58
KRH70961	Soybean	cytosol	48.55	50.55
KRH75102	Soybean	cytosol	47.49	49.45
CDY64928	Canola	cytosol	34.83	49.44
CDY71401	Canola	cytosol	34.56	49.06
Bra017763.1-P	Field mustard	cytosol, mitochondrion, plastid	45.38	47.91
Bra010556.1-P	Field mustard	cytosol, mitochondrion, nucleus	45.12	47.63
CDY24787	Canola	cytosol	39.58	47.62
GSMUA_Achr1P12690_001	Banana	plastid	56.73	47.57
CDY24788	Canola	cytosol	45.38	47.38
CDX69227	Canola	cytosol	46.17	47.3
Bra011685.1-P	Field mustard	cytosol	44.33	46.8
CDX75578	Canola	cytosol	45.38	46.49
Bra010356.1-P	Field mustard	cytosol	43.27	46.46
CDY53070	Canola	cytosol	41.69	46.33
AT4G36470.1	Thale cress	cytosol	44.85	45.82
TraesCS3B01G514000.1	Wheat	cytosol	14.78	45.53
Solyc02g084950.2.1	Tomato	cytosol	43.8	44.86
PGSC0003DMT400009296	Potato	cytosol	43.54	44.84
TraesCS3B01G513800.1	Wheat	peroxisome	14.78	44.44
CDY53071	Canola	cytosol	35.88	43.45
CDY14232	Canola	cytosol	36.41	43.4
TraesCS3B01G444900.1	Wheat	cytosol	17.94	42.24
Bra010555.1-P	Field mustard	endoplasmic reticulum, extracellular, plastid	34.3	41.53
TraesCS2B01G034900.1	Wheat	cytosol	39.05	39.26
TraesCS2B01G036300.1	Wheat	cytosol	38.79	38.99
TraesCS7B01G102600.1	Wheat	cytosol	35.36	36.12
TraesCS7B01G194700.1	Wheat	cytosol	34.3	36.11
TraesCS7B01G190700.1	Wheat	cytosol	34.83	35.68
TraesCS3B01G512900.1	Wheat	cytosol	33.51	35.47
TraesCS5B01G186200.3	Wheat	cytosol	31.66	35.4
TraesCS6B01G378100.1	Wheat	cytosol, nucleus, peroxisome	34.56	35.22
TraesCS3B01G514300.1	Wheat	cytosol	33.51	35.18
TraesCS4B01G381300.1	Wheat	cytosol	33.51	35.08
TraesCS1B01G431600.1	Wheat	cytosol	34.56	35.03
TraesCS3B01G445000.1	Wheat	cytosol	33.25	35.0
TraesCS3B01G513400.1	Wheat	peroxisome	29.82	34.45
TraesCS3B01G513300.1	Wheat	cytosol	31.93	33.99
TraesCS3B01G065700.1	Wheat	peroxisome	31.13	33.81
TraesCS3B01G421500.3	Wheat	cytosol	32.19	33.8
TraesCS3B01G513100.1	Wheat	peroxisome	31.93	33.61
TraesCS3B01G065800.1	Wheat	peroxisome	30.87	33.52
TraesCS3B01G513200.1	Wheat	peroxisome	31.66	33.33
TraesCS2B01G172500.1	Wheat	cytosol	32.98	33.24
TraesCS3B01G445100.1	Wheat	cytosol	31.13	33.15
TraesCS3B01G421400.1	Wheat	cytosol	30.34	32.58
TraesCS3B01G514200.1	Wheat	cytosol, endoplasmic reticulum	8.97	22.67
TraesCS3B01G514100.1	Wheat	cytosol, endoplasmic reticulum	8.97	22.67
TraesCS3B01G513900.1	Wheat	cytosol, endoplasmic reticulum	8.97	22.67

Protein Annotations

EnsemblPlants:TraesCS3B01G287100.1	EnsemblPlantsGene:TraesCS3B01G287100	Gene3D:1.10.1200.270	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:MeTrfase_7	InterPro:SAM-dependent_MTases
PANTHER:PTHR31009	PANTHER:PTHR31009:SF9	PFAM:PF03492	SUPFAM:SSF53335	MapMan:50.2.1	:

Description

No Description!

Coordinates

chr3B:+:459407825..459408964

Molecular Weight (calculated)

42209.5 Da

IEP (calculated)

5.435

GRAVY (calculated)

-0.094

Length

379 amino acids

Sequence
(BLAST)

001: MASSLLHCSD KLPFMDVETI LHMKEGLDET SYAQNSSLQK RGMDTLKSLI INSATDVYIS QMPERFTVAD LGCSSGPNAL CLVEDIIGGV GKVCCRSSQP
101: PPEFSVLLND LPTNDFNTIF FSLPEFTHRL KSAAKSDEWG RPMVFLSGVP GSFYGRLFPR TSVHFICSCS SLHWLSQVPP GLFDEAKTPI NKGKMYISST
201: SPPAVSVAYR RQFQRDFSLF LKSRAAEVFP GGRMVLAMLG RQTNDCVDRR TTFLWELLSE SFAALVSQGL VEQDKVDAYN VPFYAPSLQE IEVEVRLEGS
301: FSLDYVQTYE INLSSSGDAK EDGRTVSMAI RAIQESMLSH HFGPNIVDAL FHKYTQLVTE SMEREEVKSV QIGVVLTRL

Best Arabidopsis Sequence Match ( AT4G36470.1 )
(BLAST)

001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L

Arabidopsis Description

At4g36470 [Source:UniProtKB/TrEMBL;Acc:O23234]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.