CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010555.1-P	Field mustard	endoplasmic reticulum, extracellular, plastid	79.18	86.26
CDY24788	Canola	cytosol	91.2	85.67
CDY64928	Canola	cytosol	60.7	77.53
CDY71401	Canola	cytosol	60.41	77.15
CDX69227	Canola	cytosol	82.4	75.95
CDX75578	Canola	cytosol	82.11	75.68
CDY24787	Canola	cytosol	69.79	75.56
CDY14232	Canola	cytosol	66.86	71.7
AT4G36470.1	Thale cress	cytosol	78.01	71.7
CDY53071	Canola	cytosol	61.29	66.77
VIT_04s0023g02170.t01	Wine grape	cytosol	61.0	57.46
KRH75102	Soybean	cytosol	58.65	54.95
KRH70961	Soybean	cytosol	58.36	54.67
PGSC0003DMT400009296	Potato	cytosol	58.94	54.62
Solyc02g084950.2.1	Tomato	cytosol	59.24	54.59
TraesCS3B01G287100.1	Wheat	plastid	46.33	41.69
TraesCS3A01G255100.1	Wheat	cytosol	45.75	41.16
HORVU3Hr1G065790.1	Barley	cytosol, nucleus, peroxisome	45.75	41.16
TraesCS3D01G256000.1	Wheat	cytosol	45.75	41.16
Zm00001d043734_P001	Maize	cytosol	45.45	40.79
EES03488	Sorghum	cytosol	46.04	40.67
Os01t0701700-01	Rice	extracellular	44.57	40.11
GSMUA_Achr2P06560_001	Banana	cytosol	42.82	39.78
HORVU3Hr1G013850.1	Barley	cytosol	42.52	39.19
CDX96654	Canola	cytosol	41.35	37.4
CDX83754	Canola	cytosol	41.64	37.27
CDY44490	Canola	cytosol	41.35	37.2
CDX77965	Canola	cytosol	27.57	36.58
CDY58433	Canola	cytosol	33.72	36.51
CDY39364	Canola	cytosol	41.64	36.22
CDY29416	Canola	nucleus	41.64	36.22
CDY01397	Canola	cytosol	41.35	35.88
GSMUA_Achr1P25310_001	Banana	cytosol	43.11	35.77
CDY23695	Canola	endoplasmic reticulum	23.17	34.96
CDX83745	Canola	cytosol	40.18	34.95
CDY08522	Canola	cytosol	27.86	34.55
CDX83129	Canola	cytosol	36.36	34.16
CDY44851	Canola	cytosol	27.27	33.7
CDX73874	Canola	cytosol	37.54	33.42
GSMUA_Achr1P12690_001	Banana	plastid	43.99	33.19
CDY01018	Canola	endoplasmic reticulum	22.87	32.5
CDY27054	Canola	cytosol	27.27	32.29
CDY65325	Canola	cytosol	33.14	32.19
CDY69068	Canola	cytosol	36.36	31.79
CDY01022	Canola	cytosol	26.98	31.62
CDY44848	Canola	cytosol	26.69	31.38
CDY44849	Canola	cytosol	36.07	31.38
CDY19749	Canola	cytosol	36.07	31.38
CDY08520	Canola	cytosol	35.19	31.33
CDY51318	Canola	plastid	35.48	31.19
CDX70231	Canola	cytosol	35.48	30.87
CDX70229	Canola	cytosol	35.48	30.79
CDX87021	Canola	cytosol	35.19	30.61
CDX70232	Canola	cytosol, plastid	33.72	30.59
CDY47999	Canola	cytosol	34.9	30.2
CDX70230	Canola	cytosol, plastid	34.6	29.95
CDY54689	Canola	cytosol	27.86	29.41
CDX73768	Canola	cytosol	34.9	29.02
CDY39365	Canola	endoplasmic reticulum, golgi	26.69	28.09
CDY67082	Canola	cytosol, plastid	21.11	26.97
CDY11287	Canola	cytosol	36.36	25.15
Zm00001d039695_P001	Maize	cytosol	41.35	23.82
CDY51317	Canola	mitochondrion	33.72	14.63

Protein Annotations

Gene3D:1.10.1200.270	Gene3D:3.40.50.150	MapMan:50.2.1	GO:A0A078IPT9	UniProt:A0A078IPT9	EnsemblPlants:CDY53070
ProteinID:CDY53070	ProteinID:CDY53070.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00008498001	InterPro:MeTrfase_7
PFAM:PF03492	PANTHER:PTHR31009	PANTHER:PTHR31009:SF9	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EE50DF

Description

BnaC03g76600DBnaC03g76600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPT9]

Coordinates

chrLK033162:+:1269..2937

Molecular Weight (calculated)

38707.0 Da

IEP (calculated)

5.835

GRAVY (calculated)

-0.386

Length

341 amino acids

Sequence
(BLAST)

001: MEKRELEREF HMTGYARNSS VQKKSSDNAK HITLETVQQL YKETRPKSLG IADLGCSSGP NTLSTIRDII KTVEIAHHRE LPNQPLPEFS IFLNDLPQND
101: FNSIFKTLPD FHMELKRGTK NDVCPAIFIA ACPGSFYGRL FPEKTIHFIY SSFSLHWLSK VPPGLFDHQG KSINKGCINI CSSSPEAVSK AYYSQFKEDF
201: SMFLRSRSKE VVAAGRMVLI ILEREGPDHV DRGMSFTWEI LARAIADLVA QGETEEEKLD SYETQFYAAS AAEIEDNEDG MSSSELAAKT IRAVQESMLA
301: PHFGEEILNK LFDTYGRMFD EELAKEDIRP ITFVVVLRRK Q

Best Arabidopsis Sequence Match ( AT4G36470.1 )
(BLAST)

001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L

Arabidopsis Description

At4g36470 [Source:UniProtKB/TrEMBL;Acc:O23234]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.