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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016498.1-P Field mustard cytosol 99.73 95.92
CDX83754 Canola cytosol 96.29 95.28
CDX83745 Canola cytosol 94.69 91.07
AT1G19640.1 Thale cress cytosol 85.68 83.03
CDY29416 Canola nucleus 85.94 82.65
CDY39364 Canola cytosol 85.94 82.65
CDY44490 Canola cytosol 83.02 82.59
CDY01397 Canola cytosol 85.15 81.68
CDY39365 Canola endoplasmic reticulum, golgi 52.52 61.11
VIT_18s0001g12900.t01 Wine grape cytosol 56.23 56.53
VIT_18s0001g12890.t01 Wine grape cytosol 41.38 55.71
KRH15165 Soybean cytosol 54.91 54.33
VIT_18s0001g12880.t01 Wine grape cytosol 54.11 53.97
PGSC0003DMT400009594 Potato cytosol 53.05 53.05
GSMUA_Achr3P01150_001 Banana cytosol 36.34 52.69
KRH05855 Soybean cytosol 53.05 52.22
Solyc04g080660.2.1 Tomato cytosol 51.46 51.87
GSMUA_Achr11P... Banana cytosol 46.95 45.74
CDY44851 Canola cytosol 31.03 42.39
CDY58433 Canola cytosol 35.28 42.22
CDX77965 Canola cytosol 28.38 41.63
CDY53070 Canola cytosol 37.4 41.35
CDY64928 Canola cytosol 28.91 40.82
CDY23695 Canola endoplasmic reticulum 24.4 40.71
CDY24787 Canola cytosol 33.95 40.63
CDY24788 Canola cytosol 38.99 40.5
CDY71401 Canola cytosol 28.65 40.45
CDY08522 Canola cytosol 29.44 40.36
CDX83129 Canola cytosol 38.46 39.94
CDY53071 Canola cytosol 32.89 39.62
CDX69227 Canola cytosol 38.73 39.46
CDY01018 Canola endoplasmic reticulum 24.93 39.17
CDY65325 Canola cytosol 36.34 39.03
CDX75578 Canola cytosol 37.93 38.65
CDX73874 Canola cytosol 39.26 38.64
CDX70229 Canola cytosol 40.05 38.42
CDX70230 Canola cytosol, plastid 39.79 38.07
CDY14232 Canola cytosol 32.1 38.05
CDY44849 Canola cytosol 39.26 37.76
CDY19749 Canola cytosol 38.99 37.5
CDX70231 Canola cytosol 38.99 37.5
CDY69068 Canola cytosol 38.73 37.44
CDY27054 Canola cytosol 28.38 37.15
CDX87021 Canola cytosol 38.46 36.99
CDY51318 Canola plastid 37.93 36.86
CDY08520 Canola cytosol 37.14 36.55
CDY44848 Canola cytosol 28.12 36.55
CDY47999 Canola cytosol 37.67 36.04
CDX70232 Canola cytosol, plastid 35.54 35.64
CDY54689 Canola cytosol 30.24 35.29
CDY01022 Canola cytosol 26.79 34.71
CDX73768 Canola cytosol 37.4 34.39
CDY67082 Canola cytosol, plastid 23.61 33.33
CDY11287 Canola cytosol 38.2 29.21
CDY51317 Canola mitochondrion 36.87 17.68
Protein Annotations
EnsemblPlants:CDX96654EnsemblPlantsGene:GSBRNA2T00102860001Gene3D:1.10.1200.270Gene3D:3.40.50.150GO:A0A078E7I5GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016740InterPro:MeTrfase_7
InterPro:SAM-dependent_MTasesPANTHER:PTHR31009PANTHER:PTHR31009:SF12PFAM:PF03492ProteinID:CDX96654ProteinID:CDX96654.1
SEG:segSUPFAM:SSF53335UniParc:UPI0004EE2B48MapMan:11.7.3.1::
Description
BnaA08g21970D
Coordinates
chrLK031895:+:450122..452705
Molecular Weight (calculated)
42095.4 Da
IEP (calculated)
5.710
GRAVY (calculated)
-0.187
Length
377 amino acids
Sequence
(BLAST)
001: MEVMRILHMN KGNGETSYAK NSIVQSNIIS LGRRVMDEAL KKLMIRNSEI LSFGIADLGC SSGPNSLLSI SNIVETIQNL CHDLDRPVPE LSLSLNDLPS
101: NDFNYIFASL PEFYDRVKKR DNNYESLGFE HGSGGPCFVS AVPGSFYGRL FPRRSLHFVH SSSSLHWLSQ VPCGEVNKKD GVVITADLDN RGKIYLSKTS
201: PKSAHKVYAL QFQTDFSVFL RSRSEELVPG GRMVLSFLGR SSPDPTTEES CYQWELLAQA LMSLAKEGII EEENIDAFNA PYYAASPEEL KMAIEKEGSF
301: SIDRLEISPV DWEGGTLASG RRVAKTIRAV VEPMLEPTFG QKVMDELFER YAKLVGEYVY VSSPRYTIVI VSLLRMG
Best Arabidopsis Sequence Match ( AT1G19640.1 )
(BLAST)
001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG
Arabidopsis Description
JMTJasmonate O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9AR07]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.