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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83754 Canola cytosol 94.13 96.85
CDX96654 Canola cytosol 91.07 94.69
CDY39364 Canola cytosol 85.2 85.2
CDY29416 Canola nucleus 85.2 85.2
AT1G19640.1 Thale cress cytosol 83.16 83.8
CDY44490 Canola cytosol 80.36 83.11
CDY01397 Canola cytosol 82.65 82.44
CDY39365 Canola endoplasmic reticulum, golgi 54.08 65.43
VIT_18s0001g12900.t01 Wine grape cytosol 53.83 56.27
VIT_18s0001g12890.t01 Wine grape cytosol 39.29 55.0
VIT_18s0001g12880.t01 Wine grape cytosol 52.04 53.97
KRH15165 Soybean cytosol 52.04 53.54
GSMUA_Achr3P01150_001 Banana cytosol 35.2 53.08
PGSC0003DMT400009594 Potato cytosol 50.51 52.52
KRH05855 Soybean cytosol 50.0 51.17
Solyc04g080660.2.1 Tomato cytosol 48.72 51.07
GSMUA_Achr11P... Banana cytosol 45.15 45.74
CDY58433 Canola cytosol 33.67 41.9
CDY44851 Canola cytosol 29.08 41.3
CDY64928 Canola cytosol 27.81 40.82
CDY08522 Canola cytosol 28.57 40.73
CDY71401 Canola cytosol 27.55 40.45
CDY23695 Canola endoplasmic reticulum 23.21 40.27
CDY53070 Canola cytosol 34.95 40.18
CDX77965 Canola cytosol 26.28 40.08
CDY24787 Canola cytosol 31.89 39.68
CDX69227 Canola cytosol 36.99 39.19
CDX83129 Canola cytosol 35.97 38.84
CDY24788 Canola cytosol 35.97 38.84
CDY01018 Canola endoplasmic reticulum 23.72 38.75
CDY65325 Canola cytosol 34.69 38.75
CDX75578 Canola cytosol 36.22 38.38
CDX70229 Canola cytosol 38.27 38.17
CDX73874 Canola cytosol 37.24 38.12
CDX70230 Canola cytosol, plastid 38.01 37.82
CDY53071 Canola cytosol 30.1 37.7
CDY27054 Canola cytosol 27.55 37.5
CDY69068 Canola cytosol 36.99 37.18
CDY44849 Canola cytosol 36.99 36.99
CDY44848 Canola cytosol 27.3 36.9
CDY14232 Canola cytosol 29.85 36.79
CDX70231 Canola cytosol 36.73 36.73
CDY19749 Canola cytosol 36.73 36.73
CDX87021 Canola cytosol 36.22 36.22
CDY08520 Canola cytosol 35.2 36.03
CDY51318 Canola plastid 35.46 35.82
CDY47999 Canola cytosol 35.71 35.53
CDX70232 Canola cytosol, plastid 33.42 34.84
CDY01022 Canola cytosol 25.77 34.71
CDX73768 Canola cytosol 35.71 34.15
CDY54689 Canola cytosol 28.06 34.06
CDY67082 Canola cytosol, plastid 22.19 32.58
CDY11287 Canola cytosol 36.48 29.01
CDY51317 Canola mitochondrion 34.69 17.3
Protein Annotations
EnsemblPlants:CDX83745EnsemblPlantsGene:GSBRNA2T00139478001Gene3D:1.10.1200.270Gene3D:3.40.50.150GO:A0A078D3L5GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016740InterPro:MeTrfase_7
InterPro:SAM-dependent_MTasesPANTHER:PTHR31009PANTHER:PTHR31009:SF12PFAM:PF03492ProteinID:CDX83745ProteinID:CDX83745.1
SEG:segSUPFAM:SSF53335UniParc:UPI0004EEE962MapMan:11.7.3.1::
Description
BnaC08g19000D
Coordinates
chrLK031834:+:188565..191144
Molecular Weight (calculated)
43782.4 Da
IEP (calculated)
4.981
GRAVY (calculated)
-0.179
Length
392 amino acids
Sequence
(BLAST)
001: MEVMRILHMN KGNGETSYAK NSIVQSNIIS LGRRVMDEAL KKLMIRNSEI LSFGIADLGC SSGPNSLLSI SNIVETIQNL CPDLDRPVPE LSLSLNDLPS
101: NDFNYIFASL PEFYDRLKKR DNNYESLGFE HGNGGPCFVS AVPGSFYGRL FPRRSLHFVQ FSSSLHWLSQ VPCGEVNKKD GVVITADLDN KGKIYLSKTS
201: PMSAHKAYAL QFQTDFSVFL ISRSEELVPG GRMVLSFLGR SSPDPTTEEG CHQWELLAQA LMSMAKEGII EEENIDAFNA PYYATSPEEL KMAIEKEGSF
301: SIDRLEISPV DWEGGSISDD SYDIVRFKPE ALACGRRVAK TIRAVVEPTL EPTFGQKVMD ELFERYAKLM GEYLYVSSPR YAIIIVSLLR MG
Best Arabidopsis Sequence Match ( AT1G19640.1 )
(BLAST)
001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG
Arabidopsis Description
JMTJasmonate O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9AR07]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.