Factsheet for VIT_18s0001g12890.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g12900.t01	Wine grape	cytosol	96.79	72.27
VIT_18s0001g12880.t01	Wine grape	cytosol	73.21	54.23
KRH15165	Soybean	cytosol	65.71	48.29
KRH05855	Soybean	cytosol	64.29	47.0
PGSC0003DMT400009594	Potato	cytosol	60.0	44.56
Solyc04g080660.2.1	Tomato	cytosol	58.57	43.85
CDX96654	Canola	cytosol	55.71	41.38
CDX83754	Canola	cytosol	55.36	40.68
Bra012184.1-P	Field mustard	cytosol	56.79	40.46
CDY01397	Canola	cytosol	56.79	40.46
Bra025753.1-P	Field mustard	nucleus	56.43	40.31
CDY39364	Canola	cytosol	56.43	40.31
CDY29416	Canola	nucleus	56.43	40.31
CDY44490	Canola	cytosol	54.29	40.11
Bra016498.1-P	Field mustard	cytosol	55.71	39.8
AT1G19640.1	Thale cress	cytosol	55.0	39.59
CDX83745	Canola	cytosol	55.0	39.29
VIT_04s0023g02220.t01	Wine grape	cytosol	49.64	39.15
VIT_04s0023g03810.t01	Wine grape	cytosol	49.29	37.91
GSMUA_Achr3P01150_001	Banana	cytosol	34.29	36.92
VIT_04s0023g02230.t01	Wine grape	cytosol	46.79	36.9
VIT_04s0023g02200.t01	Wine grape	cytosol	47.14	36.87
VIT_04s0023g02290.t01	Wine grape	cytosol	40.71	36.66
VIT_04s0023g02240.t01	Wine grape	cytosol	46.79	36.09
VIT_04s0023g02280.t01	Wine grape	cytosol	41.79	35.78
VIT_04s0023g02310.t01	Wine grape	cytosol	45.71	35.16
GSMUA_Achr11P...	Banana	cytosol	48.21	34.88
VIT_04s0023g02170.t01	Wine grape	cytosol	44.29	34.25
VIT_04s0023g02260.t01	Wine grape	plastid	26.43	30.2
CDY39365	Canola	endoplasmic reticulum, golgi	28.57	24.69
VIT_12s0057g01060.t01	Wine grape	cytosol	47.86	24.41

Protein Annotations

Gene3D:3.40.50.150	MapMan:50.2.1	ProteinID:CCB45966	ProteinID:CCB45966.1	UniProt:F6H1I5	EMBL:FN595227
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740
GO:GO:0032259	InterPro:MeTrfase_7	PFAM:PF03492	PANTHER:PTHR31009	PANTHER:PTHR31009:SF12	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	UniParc:UPI0002109219	ArrayExpress:VIT_18s0001g12890	EnsemblPlantsGene:VIT_18s0001g12890	EnsemblPlants:VIT_18s0001g12890.t01	SEG:seg

Description

No Description!

Coordinates

chr18:-:10990319..10995000

Molecular Weight (calculated)

30749.4 Da

IEP (calculated)

4.878

GRAVY (calculated)

-0.131

Length

280 amino acids

Sequence
(BLAST)

001: MQTLHMNAGS GETSYAKNSS VQSNIISTAK PVTEEAILDI FNNVLPESVG IADLGCSSGP NALLVVSEIL DVIYAKWQQL GRPCSPEFRV YLNDLIGNDF
101: NNVFGSLPAF YNRLKEEKGS EFGPCFISGV PGSFYGRVFP SKSLHFVHSS SSLHWLSQGL IEEKKVDSFD APYYAPSPEE VKFGIYKEGS FILDRLEMFE
201: IDWDGGDGDN YDATPTSSTL SNGARVAKTI RAVVESMLAS HFGGDVMDGL FQRYGEMVGD HLAKTRAKYI NLVISLVRKV

Best Arabidopsis Sequence Match ( AT1G19640.1 )
(BLAST)

001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG

Arabidopsis Description

JMTJasmonate O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9AR07]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.