Factsheet for VIT_04s0023g03810.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P01150_001	Banana	cytosol	38.19	53.46
VIT_18s0001g12900.t01	Wine grape	cytosol	54.12	52.53
VIT_04s0023g02240.t01	Wine grape	cytosol	49.45	49.59
VIT_04s0023g02220.t01	Wine grape	cytosol	48.35	49.58
VIT_04s0023g02230.t01	Wine grape	cytosol	48.08	49.3
VIT_18s0001g12890.t01	Wine grape	cytosol	37.91	49.29
VIT_04s0023g02280.t01	Wine grape	cytosol	43.41	48.32
VIT_04s0023g02310.t01	Wine grape	cytosol	47.53	47.53
VIT_18s0001g12880.t01	Wine grape	cytosol	49.18	47.35
VIT_04s0023g02290.t01	Wine grape	cytosol	39.84	46.62
VIT_04s0023g02260.t01	Wine grape	plastid	31.32	46.53
GSMUA_Achr11P...	Banana	cytosol	46.98	44.19
VIT_04s0023g02200.t01	Wine grape	cytosol	42.31	43.02
VIT_04s0023g02170.t01	Wine grape	cytosol	39.01	39.23
VIT_12s0057g01060.t01	Wine grape	cytosol	43.68	28.96

Protein Annotations

Gene3D:1.10.1200.270	EntrezGene:100255863	wikigene:100255863	Gene3D:3.40.50.150	MapMan:50.2.1	ProteinID:CBI17336
ProteinID:CBI17336.3	UniProt:D7SNV7	EMBL:FN594959	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	EntrezGene:LOC100255863	wikigene:LOC100255863
InterPro:MeTrfase_7	PFAM:PF03492	PANTHER:PTHR31009	PANTHER:PTHR31009:SF18	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
TIGR:TC67869	UniParc:UPI00015CC27F	ArrayExpress:VIT_04s0023g03810	EnsemblPlantsGene:VIT_04s0023g03810	EnsemblPlants:VIT_04s0023g03810.t01	unigene:Vvi.5540
RefSeq:XP_002263459	RefSeq:XP_002263459.1	:	:	:	:

Description

No Description!

Coordinates

chr4:+:20315432..20318717

Molecular Weight (calculated)

40286.5 Da

IEP (calculated)

6.106

GRAVY (calculated)

-0.135

Length

364 amino acids

Sequence
(BLAST)

001: MGVQQVICMK GGVGEGSYAR NSKSQAALLS KSMPLLEQAV LDLCCTTLPE SVAIADLGCS SGPNTFFAVS EIMTIIYRRC RQLGRSPPGF WVFLNDLPGN
101: DFNAVFKSLP TFHEKMKEEN GQEFGPCHVA AVPGSFYHKL FPSRRLHFVH SSCSLHWLSQ VPPELLNKQI TNKGKIYLSK TSSPALIDAY ASQFQRDFSL
201: FLKLRSEETV PGGRMVLSLM ARRTPDPVSD ESCLLWDLLA QALQGLVSEG LIAEEKLDSY NAPYYQPYTE DLETGIENDG SFSINGLEIM VLPWDSASGG
301: QNYDRPTTAQ KIAKSMKAVQ EPMLASHFGA EIMDPLFKRL MEIIAADTRE VEHVSVLVSM TRKA

Best Arabidopsis Sequence Match ( AT1G19640.1 )
(BLAST)

001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG

Arabidopsis Description

JMTJasmonate O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9AR07]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.