Factsheet for VIT_18s0001g12900.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g12890.t01	Wine grape	cytosol	72.27	96.79
VIT_18s0001g12880.t01	Wine grape	cytosol	73.6	73.02
KRH15165	Soybean	cytosol	66.13	65.09
KRH05855	Soybean	cytosol	65.33	63.97
PGSC0003DMT400009594	Potato	cytosol	60.27	59.95
Solyc04g080660.2.1	Tomato	cytosol	58.93	59.09
GSMUA_Achr3P01150_001	Banana	cytosol	39.2	56.54
VIT_04s0023g02220.t01	Wine grape	cytosol	53.33	56.34
CDX96654	Canola	cytosol	56.53	56.23
CDX83754	Canola	cytosol	56.8	55.91
CDY44490	Canola	cytosol	56.0	55.41
Bra025753.1-P	Field mustard	nucleus	57.6	55.1
CDY29416	Canola	nucleus	57.6	55.1
CDY39364	Canola	cytosol	57.6	55.1
AT1G19640.1	Thale cress	cytosol	57.07	55.01
Bra012184.1-P	Field mustard	cytosol	57.6	54.96
CDY01397	Canola	cytosol	57.6	54.96
VIT_04s0023g03810.t01	Wine grape	cytosol	52.53	54.12
Bra016498.1-P	Field mustard	cytosol	56.53	54.08
CDX83745	Canola	cytosol	56.27	53.83
VIT_04s0023g02280.t01	Wine grape	cytosol	46.67	53.52
VIT_04s0023g02290.t01	Wine grape	cytosol	44.27	53.38
VIT_04s0023g02240.t01	Wine grape	cytosol	50.93	52.62
VIT_04s0023g02230.t01	Wine grape	cytosol	49.6	52.39
VIT_04s0023g02260.t01	Wine grape	plastid	34.13	52.24
VIT_04s0023g02310.t01	Wine grape	cytosol	49.33	50.82
VIT_04s0023g02200.t01	Wine grape	cytosol	47.2	49.44
GSMUA_Achr11P...	Banana	cytosol	50.4	48.84
VIT_04s0023g02170.t01	Wine grape	cytosol	45.07	46.69
CDY39365	Canola	endoplasmic reticulum, golgi	36.27	41.98
VIT_12s0057g01060.t01	Wine grape	cytosol	45.33	30.97

Protein Annotations

Gene3D:1.10.1200.270	EntrezGene:100260930	wikigene:100260930	EntrezGene:100266134	wikigene:100266134	MapMan:11.7.3.1
Gene3D:3.40.50.150	ProteinID:CBI19736	ProteinID:CBI19736.3	UniProt:E0CQG7	EMBL:FN595227	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259
EntrezGene:LOC100260930	wikigene:LOC100260930	EntrezGene:LOC100266134	wikigene:LOC100266134	InterPro:MeTrfase_7	PFAM:PF03492
PANTHER:PTHR31009	PANTHER:PTHR31009:SF12	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI00015C7B8D	ArrayExpress:VIT_18s0001g12900
EnsemblPlantsGene:VIT_18s0001g12900	EnsemblPlants:VIT_18s0001g12900.t01	RefSeq:XP_002281579	RefSeq:XP_002281579.1	RefSeq:XP_002281588	RefSeq:XP_002281588.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr18:-:10999096..11003121

Molecular Weight (calculated)

41546.4 Da

IEP (calculated)

5.295

GRAVY (calculated)

-0.207

Length

375 amino acids

Sequence
(BLAST)

001: MEVMQVLHMN KGAGETSYAT NSTVQSNIIS TAKPVTEEAI LDIFNNVLPE SVGIADLGCS SGPNTLLVVS EILDVIYAKW QQLGRPCSPE FRVYLNDLIG
101: NDFNNVFGSL PAFYNKLKEE KGSEFGPCFI SGVPGSFYGR VFPSKSLHFV HSSSSLHWLS QVPPGLESKD GRGSWNKGKI YISKTSPDCV LEAYSSQFQK
201: DWSVFLKSRA EEIVGGGRMV LSFMGRRSTD PRSKESCYQW ELLARALMSM VSEGLIEEKK VDSFDAPYYA PSPEEVKFGI YKEGSFILDR LEMFEIDWDG
301: GDGDNYDATP TSSTLSNGAR VAKTIRVVVE SMLASHFGGD VMDGLFQRYG EMVGDHLAKT RTKYINLVIS LVRKV

Best Arabidopsis Sequence Match ( AT1G19640.1 )
(BLAST)

001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG

Arabidopsis Description

JMTJasmonate O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9AR07]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.