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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025753.1-P Field mustard nucleus 100.0 100.0
CDY39364 Canola cytosol 96.94 96.94
CDX83754 Canola cytosol 84.18 86.61
CDX96654 Canola cytosol 82.65 85.94
CDX83745 Canola cytosol 85.2 85.2
AT1G19640.1 Thale cress cytosol 84.18 84.83
CDY44490 Canola cytosol 79.85 82.59
CDY01397 Canola cytosol 81.38 81.17
CDY39365 Canola endoplasmic reticulum, golgi 57.91 70.06
VIT_18s0001g12900.t01 Wine grape cytosol 55.1 57.6
VIT_18s0001g12890.t01 Wine grape cytosol 40.31 56.43
VIT_18s0001g12880.t01 Wine grape cytosol 52.81 54.76
KRH15165 Soybean cytosol 52.3 53.81
PGSC0003DMT400009594 Potato cytosol 51.53 53.58
GSMUA_Achr3P01150_001 Banana cytosol 34.95 52.69
Solyc04g080660.2.1 Tomato cytosol 49.49 51.87
KRH05855 Soybean cytosol 50.51 51.7
GSMUA_Achr11P... Banana cytosol 44.39 44.96
CDY44851 Canola cytosol 29.85 42.39
CDY58433 Canola cytosol 33.93 42.22
CDX77965 Canola cytosol 27.55 42.02
CDY24787 Canola cytosol 33.67 41.9
CDY08522 Canola cytosol 29.34 41.82
CDY53070 Canola cytosol 36.22 41.64
CDY71401 Canola cytosol 28.32 41.57
CDY64928 Canola cytosol 28.32 41.57
CDX69227 Canola cytosol 38.27 40.54
CDY24788 Canola cytosol 37.5 40.5
CDY23695 Canola endoplasmic reticulum 23.21 40.27
CDX75578 Canola cytosol 37.76 40.0
CDY65325 Canola cytosol 35.46 39.6
CDX70229 Canola cytosol 39.54 39.44
CDX73874 Canola cytosol 38.52 39.43
CDX83129 Canola cytosol 35.97 38.84
CDY01018 Canola endoplasmic reticulum 23.72 38.75
CDY53071 Canola cytosol 30.61 38.34
CDX70230 Canola cytosol, plastid 38.52 38.32
CDY44849 Canola cytosol 38.27 38.27
CDX70231 Canola cytosol 38.01 38.01
CDY69068 Canola cytosol 37.5 37.69
CDY19749 Canola cytosol 37.5 37.5
CDY27054 Canola cytosol 27.55 37.5
CDY51318 Canola plastid 36.99 37.37
CDY08520 Canola cytosol 36.48 37.34
CDX87021 Canola cytosol 37.24 37.24
CDY14232 Canola cytosol 30.1 37.11
CDY47999 Canola cytosol 36.73 36.55
CDY44848 Canola cytosol 26.79 36.21
CDX70232 Canola cytosol, plastid 34.44 35.9
CDX73768 Canola cytosol 36.73 35.12
CDY01022 Canola cytosol 26.02 35.05
CDY54689 Canola cytosol 28.32 34.37
CDY67082 Canola cytosol, plastid 22.96 33.71
CDY11287 Canola cytosol 36.99 29.41
CDY51317 Canola mitochondrion 35.71 17.81
Protein Annotations
EnsemblPlants:CDY29416EnsemblPlantsGene:GSBRNA2T00043012001Gene3D:1.10.1200.270Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016740GO:GO:0032259InterPro:MeTrfase_7
InterPro:SAM-dependent_MTasesPANTHER:PTHR31009PANTHER:PTHR31009:SF12PFAM:PF03492ProteinID:CDY29416ProteinID:CDY29416.1
SEG:segSUPFAM:SSF53335UniParc:UPI000253EE83UniProt:A0A078GV62MapMan:11.7.3.1:
Description
BnaA06g13800DBnaA06g13800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GV62]
Coordinates
chrLK032236:+:403088..405834
Molecular Weight (calculated)
43581.7 Da
IEP (calculated)
5.069
GRAVY (calculated)
-0.252
Length
392 amino acids
Sequence
(BLAST)
001: MEVMRILHMN KGNGETSYAK NSTAQSNIIS QGRRVLDETL KKLMMSSSEI SSFGIADLGC SSGPNSLLSI SNIVDTIQNL CPDLHRPVPE LRVSLNDLPS
101: NDFNYIFASL PDFYDRLKKK ENSNKAALGF QRGGGPCFVS AVPGSFYGRL FPRRSLHFVH SSSSLHWLSQ VPCGEMNNED GVVLTTNLDN RGKIYISKTS
201: PESAQKAYAL QFQTDFSAFL RSRSEELVPG GRMVLSFLGR SSTDPTTEEA CFQWELLAQA LMSMANEGII EEENIDAFNA PYYAASSEEL KIAIEKEGSF
301: SIDRLDISPV DWEGESISEK SYDIVRSKSE SLASGRRVAK TIRAVVEPML EPTFGQNVMD ELFERYAKIV GEYLYVSSPR YALIIVSLVR MS
Best Arabidopsis Sequence Match ( AT1G19640.1 )
(BLAST)
001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG
Arabidopsis Description
JMTJasmonate O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9AR07]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.