Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75578 | Canola | cytosol | 97.3 | 97.3 |
| CDY64928 | Canola | cytosol | 61.35 | 85.02 |
| CDY71401 | Canola | cytosol | 61.08 | 84.64 |
| CDY24787 | Canola | cytosol | 71.62 | 84.13 |
| CDY24788 | Canola | cytosol | 81.89 | 83.47 |
| CDY53070 | Canola | cytosol | 75.95 | 82.4 |
| AT4G36470.1 | Thale cress | cytosol | 82.43 | 82.21 |
| CDY14232 | Canola | cytosol | 67.03 | 77.99 |
| CDY53071 | Canola | cytosol | 63.24 | 74.76 |
| VIT_04s0023g02170.t01 | Wine grape | cytosol | 61.89 | 63.26 |
| KRH75102 | Soybean | cytosol | 60.54 | 61.54 |
| KRH70961 | Soybean | cytosol | 60.27 | 61.26 |
| PGSC0003DMT400009296 | Potato | cytosol | 58.65 | 58.97 |
| Solyc02g084950.2.1 | Tomato | cytosol | 58.38 | 58.38 |
| TraesCS3B01G287100.1 | Wheat | plastid | 47.3 | 46.17 |
| HORVU3Hr1G065790.1 | Barley | cytosol, nucleus, peroxisome | 46.76 | 45.65 |
| TraesCS3A01G255100.1 | Wheat | cytosol | 46.76 | 45.65 |
| EES03488 | Sorghum | cytosol | 47.57 | 45.6 |
| TraesCS3D01G256000.1 | Wheat | cytosol | 46.49 | 45.38 |
| Zm00001d043734_P001 | Maize | cytosol | 46.22 | 45.0 |
| Os01t0701700-01 | Rice | extracellular | 45.41 | 44.33 |
| GSMUA_Achr2P06560_001 | Banana | cytosol | 43.51 | 43.87 |
| HORVU3Hr1G013850.1 | Barley | cytosol | 43.78 | 43.78 |
| CDY23695 | Canola | endoplasmic reticulum | 25.14 | 41.15 |
| CDY58433 | Canola | cytosol | 33.78 | 39.68 |
| GSMUA_Achr1P25310_001 | Banana | cytosol | 43.78 | 39.42 |
| CDX83754 | Canola | cytosol | 40.0 | 38.85 |
| CDY65325 | Canola | cytosol | 36.76 | 38.75 |
| CDX96654 | Canola | cytosol | 39.46 | 38.73 |
| CDY44490 | Canola | cytosol | 39.46 | 38.52 |
| CDY39364 | Canola | cytosol | 40.81 | 38.52 |
| CDY01018 | Canola | endoplasmic reticulum | 24.86 | 38.33 |
| CDY29416 | Canola | nucleus | 40.54 | 38.27 |
| CDY44851 | Canola | cytosol | 28.38 | 38.04 |
| CDY01397 | Canola | cytosol | 40.0 | 37.66 |
| CDX73874 | Canola | cytosol | 38.92 | 37.6 |
| CDY08522 | Canola | cytosol | 27.84 | 37.45 |
| CDY27054 | Canola | cytosol | 28.92 | 37.15 |
| CDX83745 | Canola | cytosol | 39.19 | 36.99 |
| CDX77965 | Canola | cytosol | 25.68 | 36.97 |
| CDX83129 | Canola | cytosol | 35.95 | 36.64 |
| CDY44848 | Canola | cytosol | 28.65 | 36.55 |
| CDY08520 | Canola | cytosol | 37.57 | 36.29 |
| CDY69068 | Canola | cytosol | 38.11 | 36.15 |
| GSMUA_Achr1P12690_001 | Banana | plastid | 43.78 | 35.84 |
| CDX70229 | Canola | cytosol | 37.57 | 35.37 |
| CDY51318 | Canola | plastid | 36.76 | 35.05 |
| CDY01022 | Canola | cytosol | 27.57 | 35.05 |
| CDY47999 | Canola | cytosol | 37.3 | 35.03 |
| CDY44849 | Canola | cytosol | 37.03 | 34.95 |
| CDY19749 | Canola | cytosol | 36.76 | 34.69 |
| CDX87021 | Canola | cytosol | 36.22 | 34.18 |
| CDX70231 | Canola | cytosol | 36.22 | 34.18 |
| CDX70230 | Canola | cytosol, plastid | 36.22 | 34.01 |
| CDX70232 | Canola | cytosol, plastid | 33.78 | 33.24 |
| CDX73768 | Canola | cytosol | 35.14 | 31.71 |
| CDY54689 | Canola | cytosol | 27.57 | 31.58 |
| CDY67082 | Canola | cytosol, plastid | 22.43 | 31.09 |
| CDY39365 | Canola | endoplasmic reticulum, golgi | 25.68 | 29.32 |
| CDY11287 | Canola | cytosol | 37.57 | 28.19 |
| Zm00001d039695_P001 | Maize | cytosol | 41.89 | 26.18 |
| CDY51317 | Canola | mitochondrion | 34.05 | 16.03 |
Protein Annotations
| EnsemblPlants:CDX69227 | EnsemblPlantsGene:GSBRNA2T00131032001 | Gene3D:1.10.1200.270 | Gene3D:3.40.50.150 | GO:A0A078BY08 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | InterPro:MeTrfase_7 |
| InterPro:SAM-dependent_MTases | PANTHER:PTHR31009 | PANTHER:PTHR31009:SF9 | PFAM:PF03492 | ProteinID:CDX69227 | ProteinID:CDX69227.1 |
| SUPFAM:SSF53335 | UniParc:UPI0004EE5547 | MapMan:50.2.1 | : | : | : |
Description
BnaC01g02260D
Coordinates
chrLK031789:+:3586657..3588100
Molecular Weight (calculated)
42028.8 Da
IEP (calculated)
4.983
GRAVY (calculated)
-0.468
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRDLEREF HMTGGDGKTS YARNSTFQKK ASDQAKHITL ETLQELYKET KPKSLGIADL GCSSGPNTLS TIRDIIKAVE FSHRREIPSQ PLPEFSIFLN
101: DLPGNDFNSI FKTLPDFHIE LKRDAKNGEC PSVFISAYPG SFYGRLFPEN TIHFIYASYS LHWLSKIPPD LYDDQGKSIN KGCVNICSSS PEAVSKAYYS
201: QFKEDFSMFL RFRSKEVVAS GRMVLIMLGR ESPDHVDRGN SFLWELLARS IANLVAQGET EEEKLNSYEM HFYAPSAAEI EDEVKEEGSF ELEKLEMLEV
301: DKEKGDEDGV SYGKTAAKTV RAVQESMLAL HFGEEILDKL FDTYGRMVDE ELAKEDIRPI TFVVVLKRKL
101: DLPGNDFNSI FKTLPDFHIE LKRDAKNGEC PSVFISAYPG SFYGRLFPEN TIHFIYASYS LHWLSKIPPD LYDDQGKSIN KGCVNICSSS PEAVSKAYYS
201: QFKEDFSMFL RFRSKEVVAS GRMVLIMLGR ESPDHVDRGN SFLWELLARS IANLVAQGET EEEKLNSYEM HFYAPSAAEI EDEVKEEGSF ELEKLEMLEV
301: DKEKGDEDGV SYGKTAAKTV RAVQESMLAL HFGEEILDKL FDTYGRMVDE ELAKEDIRPI TFVVVLKRKL
001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L
Arabidopsis Description
At4g36470 [Source:UniProtKB/TrEMBL;Acc:O23234]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.