Factsheet for PGSC0003DMT400009296

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g084950.2.1	Tomato	cytosol	95.38	94.86
VIT_04s0023g02170.t01	Wine grape	cytosol	67.12	68.23
KRH70961	Soybean	cytosol	64.13	64.84
KRH75102	Soybean	cytosol	63.59	64.29
Bra017763.1-P	Field mustard	cytosol, mitochondrion, plastid	58.42	59.89
Bra011685.1-P	Field mustard	cytosol	58.15	59.61
CDY53070	Canola	cytosol	54.62	58.94
CDY24787	Canola	cytosol	50.27	58.73
CDX69227	Canola	cytosol	58.97	58.65
CDX75578	Canola	cytosol	58.97	58.65
AT4G36470.1	Thale cress	cytosol	58.42	57.95
CDY24788	Canola	cytosol	57.07	57.85
CDY71401	Canola	cytosol	41.85	57.68
Bra010356.1-P	Field mustard	cytosol	54.62	56.94
CDY64928	Canola	cytosol	41.3	56.93
Bra010556.1-P	Field mustard	cytosol, mitochondrion, nucleus	55.43	56.82
CDY14232	Canola	cytosol	48.64	56.29
CDY53071	Canola	cytosol	45.38	53.35
Bra010555.1-P	Field mustard	endoplasmic reticulum, extracellular, plastid	45.38	53.35
GSMUA_Achr2P06560_001	Banana	cytosol	46.2	46.32
HORVU3Hr1G065790.1	Barley	cytosol, nucleus, peroxisome	45.11	43.8
TraesCS3D01G256000.1	Wheat	cytosol	45.11	43.8
TraesCS3B01G287100.1	Wheat	plastid	44.84	43.54
EES03488	Sorghum	cytosol	45.38	43.26
TraesCS3A01G255100.1	Wheat	cytosol	44.29	43.01
PGSC0003DMT400009594	Potato	cytosol	44.02	42.97
Os01t0701700-01	Rice	extracellular	44.02	42.74
Zm00001d043734_P001	Maize	cytosol	44.02	42.63
HORVU3Hr1G013850.1	Barley	cytosol	42.12	41.89
GSMUA_Achr1P25310_001	Banana	cytosol	44.02	39.42
PGSC0003DMT400049166	Potato	cytosol	36.41	37.85
GSMUA_Achr1P12690_001	Banana	plastid	46.2	37.61
PGSC0003DMT400076187	Potato	cytosol	36.68	37.19
PGSC0003DMT400004581	Potato	cytosol	36.41	36.61
PGSC0003DMT400004564	Potato	cytosol, mitochondrion, nucleus	20.38	32.89
Zm00001d039695_P001	Maize	cytosol	40.22	25.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400009296	EnsemblPlantsGene:PGSC0003DMG400003607	EntrezGene:102590256	Gene3D:1.10.1200.270	Gene3D:3.40.50.150	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259
InterPro:MeTrfase_7	InterPro:SAM-dependent_MTases	PANTHER:PTHR31009	PANTHER:PTHR31009:SF9	PFAM:PF03492	PGSC:PGSC0003DMG400003607
RefSeq:XP_006340655.1	SUPFAM:SSF53335	UniParc:UPI000294C3CC	UniProt:M0ZVZ0	MapMan:50.2.1	:

Description

Jasmonate O-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400003607]

Coordinates

chr2:+:40191560..40194096

Molecular Weight (calculated)

41799.8 Da

IEP (calculated)

5.811

GRAVY (calculated)

-0.357

Length

368 amino acids

Sequence
(BLAST)

001: MDVEKVFHMT GGVGETSYSR NSSLQKKASE MVKHITLETV EEVYLATKPK SIGIADLGCS SGPNTLSNIK DILDKIEGTS SNKLKQSAPE FRVFLNDLPT
101: NDFNAIFQAL PEFHQWLKQK NGSGHENKGS NSNIYVAAYP GSFYGRLFPD HCLHFIYSSY SLHWLSKVPR GLYDEQGNSL NKNSIYISEN SPCEVSKVYF
201: DQFKEDLSLF LQSRSDELVS GGKMVLILLG REGFNHVDRG NAFFWKILYQ ALTNLISKGE VEKEKLDSYE VHFYAPCKEE IEEVARENGC FEVERLEMFE
301: IEKTIGKGIS YGTMVAMTVR SIQESMLAHH FGETIIQGLF KEYGRLVDEE MAKEEIRPIT FLLVLRKP

Best Arabidopsis Sequence Match ( AT4G36470.1 )
(BLAST)

001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L

Arabidopsis Description

At4g36470 [Source:UniProtKB/TrEMBL;Acc:O23234]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.