Factsheet for Solyc02g084950.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009296	Potato	cytosol	94.86	95.38
VIT_04s0023g02170.t01	Wine grape	cytosol	65.68	67.13
KRH75102	Soybean	cytosol	62.97	64.01
KRH70961	Soybean	cytosol	62.7	63.74
Bra017763.1-P	Field mustard	cytosol, mitochondrion, plastid	57.84	59.61
Bra011685.1-P	Field mustard	cytosol	57.57	59.33
CDY53070	Canola	cytosol	54.59	59.24
CDY24787	Canola	cytosol	50.0	58.73
CDY24788	Canola	cytosol	57.3	58.4
CDX75578	Canola	cytosol	58.38	58.38
CDX69227	Canola	cytosol	58.38	58.38
CDY71401	Canola	cytosol	41.89	58.05
AT4G36470.1	Thale cress	cytosol	57.84	57.68
CDY64928	Canola	cytosol	41.35	57.3
Bra010356.1-P	Field mustard	cytosol	54.32	56.94
Bra010556.1-P	Field mustard	cytosol, mitochondrion, nucleus	54.86	56.55
CDY14232	Canola	cytosol	48.11	55.97
Bra010555.1-P	Field mustard	endoplasmic reticulum, extracellular, plastid	45.41	53.67
CDY53071	Canola	cytosol	45.14	53.35
GSMUA_Achr2P06560_001	Banana	cytosol	46.49	46.87
HORVU3Hr1G065790.1	Barley	cytosol, nucleus, peroxisome	45.14	44.06
TraesCS3D01G256000.1	Wheat	cytosol	45.14	44.06
TraesCS3B01G287100.1	Wheat	plastid	44.86	43.8
Solyc04g080660.2.1	Tomato	cytosol	43.78	43.32
TraesCS3A01G255100.1	Wheat	cytosol	44.32	43.27
Os01t0701700-01	Rice	extracellular	44.05	43.01
EES03488	Sorghum	cytosol	44.86	43.01
Zm00001d043734_P001	Maize	cytosol	43.78	42.63
HORVU3Hr1G013850.1	Barley	cytosol	42.16	42.16
Solyc04g055260.2.1	Tomato	nucleus	39.73	40.27
Solyc01g081340.2.1	Tomato	cytosol	38.92	39.89
GSMUA_Achr1P25310_001	Banana	cytosol	44.05	39.66
Solyc10g061840.1.1	Tomato	cytosol	37.84	39.55
Solyc09g091550.2.1	Tomato	cytosol	38.11	39.06
Solyc09g091530.1.1	Tomato	cytosol	36.76	37.78
GSMUA_Achr1P12690_001	Banana	plastid	45.95	37.61
Solyc01g080990.2.1	Tomato	cytosol	35.68	37.18
Solyc09g091540.1.1	Tomato	cytosol	36.49	36.99
Solyc01g080970.2.1	Tomato	cytosol	32.16	36.96
Zm00001d039695_P001	Maize	cytosol	40.0	25.0

Protein Annotations

EnsemblPlants:Solyc02g084950.2.1	EnsemblPlantsGene:Solyc02g084950.2	Gene3D:1.10.1200.270	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:MeTrfase_7
InterPro:SAM-dependent_MTases	PANTHER:PTHR31009	PANTHER:PTHR31009:SF9	PFAM:PF03492	SUPFAM:SSF53335	UniParc:UPI0002768E48
UniProt:K4BB09	MapMan:50.2.1	:	:	:	:

Description

No Description!

Coordinates

chr2:+:47987395..47989876

Molecular Weight (calculated)

42364.5 Da

IEP (calculated)

5.485

GRAVY (calculated)

-0.386

Length

370 amino acids

Sequence
(BLAST)

001: MDVEKVFHMT GGVGETSYSR NSSLQKKASE MVKHITLETV EEVYVATKPK SIGIADLGCS SGPNTLSNIK DILDKIEGIS HNKLKQSAPE FRVFLNDLPT
101: NDFNAIFQAL PEFHQWLKQK DGSDDDENRV TNSSNIYVAA YPGSFYGRLF PDHCLHFIYS SYSLHWLSKV PRGLYDEQGN SLNKKSIYIS ENSPCEVSKV
201: YFDQFKEDFS LFLQSRSDEL VSRGKMVLIL LGREGFNHVD RGNAFFWKIL YQALTNLISK GEVEKEKLDS YEVHFYAPCK EEIEKVAREN GCFEVERLEM
301: FEIEKTIGKG MSYGTMVAMT VRSIQESMLA HHFGEAIIEG LFKEYGRLVD EEMEKEEIRP ITFLLVLRKP

Best Arabidopsis Sequence Match ( AT4G36470.1 )
(BLAST)

001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L

Arabidopsis Description

At4g36470 [Source:UniProtKB/TrEMBL;Acc:O23234]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.