Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011685.1-P | Field mustard | cytosol | 95.14 | 98.05 |
| CDX69227 | Canola | cytosol | 97.3 | 97.3 |
| CDY64928 | Canola | cytosol | 61.62 | 85.39 |
| CDY71401 | Canola | cytosol | 61.08 | 84.64 |
| CDY24787 | Canola | cytosol | 71.08 | 83.49 |
| CDY24788 | Canola | cytosol | 81.62 | 83.2 |
| AT4G36470.1 | Thale cress | cytosol | 82.43 | 82.21 |
| CDY53070 | Canola | cytosol | 75.68 | 82.11 |
| CDY14232 | Canola | cytosol | 66.76 | 77.67 |
| CDY53071 | Canola | cytosol | 62.7 | 74.12 |
| VIT_04s0023g02170.t01 | Wine grape | cytosol | 62.43 | 63.81 |
| KRH75102 | Soybean | cytosol | 60.81 | 61.81 |
| KRH70961 | Soybean | cytosol | 60.27 | 61.26 |
| PGSC0003DMT400009296 | Potato | cytosol | 58.65 | 58.97 |
| Solyc02g084950.2.1 | Tomato | cytosol | 58.38 | 58.38 |
| TraesCS3B01G287100.1 | Wheat | plastid | 46.49 | 45.38 |
| HORVU3Hr1G065790.1 | Barley | cytosol, nucleus, peroxisome | 45.95 | 44.85 |
| TraesCS3A01G255100.1 | Wheat | cytosol | 45.68 | 44.59 |
| TraesCS3D01G256000.1 | Wheat | cytosol | 45.68 | 44.59 |
| EES03488 | Sorghum | cytosol | 46.49 | 44.56 |
| Zm00001d043734_P001 | Maize | cytosol | 45.14 | 43.95 |
| GSMUA_Achr2P06560_001 | Banana | cytosol | 43.51 | 43.87 |
| Os01t0701700-01 | Rice | extracellular | 44.59 | 43.54 |
| HORVU3Hr1G013850.1 | Barley | cytosol | 42.97 | 42.97 |
| CDY23695 | Canola | endoplasmic reticulum | 25.14 | 41.15 |
| CDY58433 | Canola | cytosol | 34.32 | 40.32 |
| GSMUA_Achr1P25310_001 | Banana | cytosol | 43.51 | 39.17 |
| CDY01018 | Canola | endoplasmic reticulum | 24.86 | 38.33 |
| CDX83754 | Canola | cytosol | 39.19 | 38.06 |
| CDY44851 | Canola | cytosol | 28.38 | 38.04 |
| CDY39364 | Canola | cytosol | 40.27 | 38.01 |
| CDY44490 | Canola | cytosol | 38.92 | 37.99 |
| CDX96654 | Canola | cytosol | 38.65 | 37.93 |
| CDY65325 | Canola | cytosol | 35.95 | 37.89 |
| CDY29416 | Canola | nucleus | 40.0 | 37.76 |
| CDX73874 | Canola | cytosol | 38.92 | 37.6 |
| CDY01397 | Canola | cytosol | 39.46 | 37.15 |
| CDY08522 | Canola | cytosol | 27.3 | 36.73 |
| CDY44848 | Canola | cytosol | 28.65 | 36.55 |
| CDY27054 | Canola | cytosol | 28.38 | 36.46 |
| CDY69068 | Canola | cytosol | 38.38 | 36.41 |
| CDX83129 | Canola | cytosol | 35.68 | 36.36 |
| CDX83745 | Canola | cytosol | 38.38 | 36.22 |
| CDX77965 | Canola | cytosol | 25.14 | 36.19 |
| CDY08520 | Canola | cytosol | 37.3 | 36.03 |
| GSMUA_Achr1P12690_001 | Banana | plastid | 43.78 | 35.84 |
| CDX70229 | Canola | cytosol | 37.3 | 35.11 |
| CDY01022 | Canola | cytosol | 27.3 | 34.71 |
| CDY51318 | Canola | plastid | 35.95 | 34.28 |
| CDY47999 | Canola | cytosol | 36.49 | 34.26 |
| CDY44849 | Canola | cytosol | 36.22 | 34.18 |
| CDY19749 | Canola | cytosol | 36.22 | 34.18 |
| CDX70230 | Canola | cytosol, plastid | 35.95 | 33.76 |
| CDX87021 | Canola | cytosol | 35.68 | 33.67 |
| CDX70231 | Canola | cytosol | 35.41 | 33.42 |
| CDX70232 | Canola | cytosol, plastid | 33.51 | 32.98 |
| CDY54689 | Canola | cytosol | 27.57 | 31.58 |
| CDX73768 | Canola | cytosol | 34.59 | 31.22 |
| CDY67082 | Canola | cytosol, plastid | 22.43 | 31.09 |
| CDY39365 | Canola | endoplasmic reticulum, golgi | 25.41 | 29.01 |
| CDY11287 | Canola | cytosol | 37.84 | 28.4 |
| Zm00001d039695_P001 | Maize | cytosol | 41.08 | 25.68 |
| CDY51317 | Canola | mitochondrion | 33.78 | 15.9 |
Protein Annotations
| EnsemblPlants:CDX75578 | EnsemblPlantsGene:GSBRNA2T00121485001 | Gene3D:1.10.1200.270 | Gene3D:3.40.50.150 | GO:A0A078CKK5 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | InterPro:MeTrfase_7 |
| InterPro:SAM-dependent_MTases | PANTHER:PTHR31009 | PANTHER:PTHR31009:SF9 | PFAM:PF03492 | ProteinID:CDX75578 | ProteinID:CDX75578.1 |
| SUPFAM:SSF53335 | UniParc:UPI0004EDDF37 | MapMan:50.2.1 | : | : | : |
Description
BnaA01g01240D
Coordinates
chrLK031804:+:1771160..1772622
Molecular Weight (calculated)
42028.8 Da
IEP (calculated)
5.062
GRAVY (calculated)
-0.450
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRDLEREF HMTGEDGKTS YARNSTFQKK ASDQAKHITL ETLQELYKET KPKSLGIADL GCSSGPNTLS TIRDIIKAVE FSHRREIPSQ PLPEFTIFLN
101: DLPGNDFNSI FKTLPDFHIE LKRDAKNGEC PSVFISAYPG SFYGRLFPEN TIHFIYASYS LHWLSKIPPA LYDDQGKSIN KGCVNICSSS PEAVSKAYYS
201: QFKEDFSMFL RFRSKEVAAS GRMVLIMLGR EGPDHVDRGN SFFWELLARS IANLVAQGET EEEKLDSYEM HFYAPSAAEI EDEVKEEGSF ELKKLEMLEV
301: DKEKGDEDGV SYGKAAAKTV RAVQESMLAL HFGEEILDKL FDIYGRMVDE ELAKEDIRPI TFVVVLKRKL
101: DLPGNDFNSI FKTLPDFHIE LKRDAKNGEC PSVFISAYPG SFYGRLFPEN TIHFIYASYS LHWLSKIPPA LYDDQGKSIN KGCVNICSSS PEAVSKAYYS
201: QFKEDFSMFL RFRSKEVAAS GRMVLIMLGR EGPDHVDRGN SFFWELLARS IANLVAQGET EEEKLDSYEM HFYAPSAAEI EDEVKEEGSF ELKKLEMLEV
301: DKEKGDEDGV SYGKAAAKTV RAVQESMLAL HFGEEILDKL FDIYGRMVDE ELAKEDIRPI TFVVVLKRKL
001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L
Arabidopsis Description
At4g36470 [Source:UniProtKB/TrEMBL;Acc:O23234]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.