Factsheet for TraesCS3D01G256000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G065790.1	Barley	cytosol, nucleus, peroxisome	98.94	98.94
TraesCS3A01G255100.1	Wheat	cytosol	98.68	98.68
TraesCS3B01G287100.1	Wheat	plastid	98.15	98.15
Os01t0701700-01	Rice	extracellular	87.34	87.34
EES03488	Sorghum	cytosol	88.65	87.05
Zm00001d043734_P001	Maize	cytosol	86.54	86.32
GSMUA_Achr2P06560_001	Banana	cytosol	55.41	57.22
GSMUA_Achr1P25310_001	Banana	cytosol	56.2	51.82
VIT_04s0023g02170.t01	Wine grape	cytosol	49.08	51.38
KRH70961	Soybean	cytosol	48.81	50.82
KRH75102	Soybean	cytosol	47.76	49.73
CDY64928	Canola	cytosol	34.04	48.31
CDY71401	Canola	cytosol	33.77	47.94
GSMUA_Achr1P12690_001	Banana	plastid	56.73	47.57
Bra017763.1-P	Field mustard	cytosol, mitochondrion, plastid	44.85	47.35
Bra010556.1-P	Field mustard	cytosol, mitochondrion, nucleus	44.85	47.35
CDY24787	Canola	cytosol	39.31	47.3
CDY24788	Canola	cytosol	44.85	46.83
CDX69227	Canola	cytosol	45.38	46.49
Bra010356.1-P	Field mustard	cytosol	43.01	46.18
Bra011685.1-P	Field mustard	cytosol	43.54	45.96
CDY53070	Canola	cytosol	41.16	45.75
CDX75578	Canola	cytosol	44.59	45.68
Solyc02g084950.2.1	Tomato	cytosol	44.06	45.14
PGSC0003DMT400009296	Potato	cytosol	43.8	45.11
AT4G36470.1	Thale cress	cytosol	44.06	45.01
CDY53071	Canola	cytosol	35.62	43.13
CDY14232	Canola	cytosol	36.15	43.08
TraesCS3D01G406400.1	Wheat	cytosol	21.64	41.21
Bra010555.1-P	Field mustard	endoplasmic reticulum, extracellular, plastid	33.77	40.89
TraesCS3D01G466800.1	Wheat	cytosol	16.62	39.62
TraesCS5D01G193400.1	Wheat	cytosol	19.79	38.66
TraesCS2D01G026400.1	Wheat	cytosol	38.26	38.36
TraesCS7D01G198200.1	Wheat	cytosol	35.62	36.39
TraesCS3D01G466900.1	Wheat	peroxisome	34.3	36.11
TraesCS7D01G229500.1	Wheat	cytosol	34.04	35.83
TraesCS3D01G466300.1	Wheat	peroxisome	33.25	35.69
TraesCS1D01G410300.1	Wheat	cytosol	35.09	35.56
TraesCS6D01G327800.1	Wheat	cytosol, nucleus, peroxisome	34.56	35.22
TraesCS5D01G560200.1	Wheat	cytosol	33.25	35.1
TraesCS3D01G462800.1	Wheat	cytosol	32.98	34.92
TraesCS7D01G225700.1	Wheat	cytosol	34.04	34.77
TraesCS7D01G225800.1	Wheat	cytosol	34.04	34.77
TraesCS3D01G464300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	32.72	34.44
TraesCS3D01G382000.1	Wheat	cytosol	32.72	34.35
TraesCS7D01G225600.1	Wheat	cytosol	29.82	33.53
TraesCS2D01G151600.1	Wheat	cytosol	32.98	33.42
TraesCS7D01G037800.1	Wheat	cytosol	32.45	33.15
TraesCS3D01G463700.1	Wheat	cytosol	30.08	33.14
TraesCS3D01G406500.1	Wheat	plastid	33.51	32.99
TraesCS1D01G031100.1	Wheat	peroxisome	30.87	32.68
TraesCS2D01G151700.1	Wheat	cytosol	29.55	30.6
TraesCS3D01G406300.1	Wheat	peroxisome	18.73	29.58

Protein Annotations

EnsemblPlants:TraesCS3D01G256000.1	EnsemblPlantsGene:TraesCS3D01G256000	Gene3D:1.10.1200.270	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:MeTrfase_7	InterPro:SAM-dependent_MTases
PANTHER:PTHR31009	PANTHER:PTHR31009:SF9	PFAM:PF03492	SUPFAM:SSF53335	MapMan:50.2.1	:

Description

No Description!

Coordinates

chr3D:+:357710633..357711772

Molecular Weight (calculated)

42196.4 Da

IEP (calculated)

4.928

GRAVY (calculated)

-0.086

Length

379 amino acids

Sequence
(BLAST)

001: MASSLLHCSD KLPFMDVETI LHMKEGLDES SYAQNSSLQK RGMDTLKSLI INSATDVYIS QMPERFTVAD LGCSSGPNAL CLVEDIIGGI GKVCCRSSQP
101: PPEFSVLLND LPTNDFNTIF FSLPEFTHRL KSAAKSDEWG RPMVFLSGVP GSFYGRLFPR TSVHFICSCS SLHWLSQVPP GLFDEAKAPI NKGKMYISST
201: SPPAVSVAYR RQFQRDFSLF LKSRAAEVFP GGRMVLAMLG RQTDECVDRR TTFLWELLSE SFAALVSQGL VEQDKVDAYN VPFYAPSLQE IEVEVRLEGS
301: FSLDYVQTYE INLSSSGDAK EDGRTVSMAI RAIQESMLSH HFGPDIVDAL FHEYTQLVTE SMEREEVKSV QIGVVLTRL

Best Arabidopsis Sequence Match ( AT4G36470.1 )
(BLAST)

001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L

Arabidopsis Description

At4g36470 [Source:UniProtKB/TrEMBL;Acc:O23234]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.