Factsheet for Bra010556.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24787	Canola	cytosol	83.84	95.56
CDY53071	Canola	cytosol	75.77	86.9
Bra011685.1-P	Field mustard	cytosol	82.17	82.17
Bra017763.1-P	Field mustard	cytosol, mitochondrion, plastid	81.89	81.89
Bra010356.1-P	Field mustard	cytosol	77.44	78.75
AT4G36470.1	Thale cress	cytosol	79.94	77.36
Bra010555.1-P	Field mustard	endoplasmic reticulum, extracellular, plastid	65.46	75.08
VIT_04s0023g02170.t01	Wine grape	cytosol	61.0	60.5
KRH75102	Soybean	cytosol	60.45	59.62
KRH70961	Soybean	cytosol	59.89	59.07
PGSC0003DMT400009296	Potato	cytosol	56.82	55.43
Solyc02g084950.2.1	Tomato	cytosol	56.55	54.86
TraesCS3B01G287100.1	Wheat	plastid	47.63	45.12
HORVU3Hr1G065790.1	Barley	cytosol, nucleus, peroxisome	47.63	45.12
EES03488	Sorghum	cytosol	48.47	45.08
Zm00001d043734_P001	Maize	cytosol	47.63	45.0
TraesCS3D01G256000.1	Wheat	cytosol	47.35	44.85
TraesCS3A01G255100.1	Wheat	cytosol	47.35	44.85
Os01t0701700-01	Rice	extracellular	46.52	44.06
GSMUA_Achr2P06560_001	Banana	cytosol	44.57	43.6
HORVU3Hr1G013850.1	Barley	cytosol	44.29	42.97
Bra025753.1-P	Field mustard	nucleus	42.62	39.03
GSMUA_Achr1P25310_001	Banana	cytosol	44.57	38.93
Bra034838.1-P	Field mustard	cytosol	37.6	38.9
Bra012184.1-P	Field mustard	cytosol	41.78	38.17
Bra016498.1-P	Field mustard	cytosol	41.23	37.76
Bra009458.1-P	Field mustard	cytosol	32.87	36.99
Bra001405.1-P	Field mustard	cytosol	39.28	36.81
Bra009459.1-P	Field mustard	cytosol	33.15	35.95
GSMUA_Achr1P12690_001	Banana	plastid	45.13	35.84
Bra030012.1-P	Field mustard	cytosol	35.93	35.54
Bra036847.1-P	Field mustard	cytosol	26.18	34.81
Bra022603.1-P	Field mustard	cytosol	27.3	34.03
Bra034836.1-P	Field mustard	cytosol	36.21	33.94
Bra036601.1-P	Field mustard	cytosol	36.21	33.25
Bra009460.1-P	Field mustard	cytosol	35.93	32.91
Bra005802.1-P	Field mustard	cytosol	37.33	27.18
Zm00001d039695_P001	Maize	cytosol	42.9	26.01

Protein Annotations

EnsemblPlants:Bra010556.1	EnsemblPlants:Bra010556.1-P	EnsemblPlantsGene:Bra010556	Gene3D:1.10.1200.270	Gene3D:3.40.50.150	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259
InterPro:MeTrfase_7	InterPro:SAM-dependent_MTases	PANTHER:PTHR31009	PANTHER:PTHR31009:SF9	PFAM:PF03492	SUPFAM:SSF53335
UniParc:UPI0002546005	UniProt:M4D256	MapMan:50.2.1	:	:	:

Description

AT4G36470 (E=7e-165) | S-adenosyl-L-methionine:carboxyl methyltransferase family protein

Coordinates

chrA08:+:15160155..15161662

Molecular Weight (calculated)

40475.1 Da

IEP (calculated)

5.652

GRAVY (calculated)

-0.300

Length

359 amino acids

Sequence
(BLAST)

001: MTGGVGKTSY ARNSSFQKKA YDQAKDIILK TLQQLYKETR PKSLGIADLG CSSGPNTLST IRDIIKAVIV AHHREIPNEP LPEFSVSLND LPRNDFNSIF
101: KSLPDFHIEL KRDTKNDHSP SVFIAAFPGS FYGRLFPENT IHFIYASFSL HWLSKIPSAW YDDQGKSINK GCINICSSSP EAVSKAYYSQ FKEDFSMFLR
201: SRSKEVVAAG RMVLIILGRE GPEHVGRGNS FLWELLARAI ADLVSQGEIE EEKLDSYELH FYAPSAAEIE GEVNKEGSFE LEKLDMLEVD MEWGNEDGIS
301: YGKAVAKTIR AVQESMLASH FGEEILDKLF DTYGRIIDEE VAKEDIKHIT LFVVLRRKL

Best Arabidopsis Sequence Match ( AT4G36470.1 )
(BLAST)

001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L

Arabidopsis Description

At4g36470 [Source:UniProtKB/TrEMBL;Acc:O23234]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.