Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29416 | Canola | nucleus | 96.94 | 96.94 |
| CDX83754 | Canola | cytosol | 83.93 | 86.35 |
| CDX96654 | Canola | cytosol | 82.65 | 85.94 |
| CDX83745 | Canola | cytosol | 85.2 | 85.2 |
| AT1G19640.1 | Thale cress | cytosol | 84.18 | 84.83 |
| CDY44490 | Canola | cytosol | 79.85 | 82.59 |
| CDY01397 | Canola | cytosol | 81.63 | 81.42 |
| CDY39365 | Canola | endoplasmic reticulum, golgi | 57.4 | 69.44 |
| VIT_18s0001g12900.t01 | Wine grape | cytosol | 55.1 | 57.6 |
| VIT_18s0001g12890.t01 | Wine grape | cytosol | 40.31 | 56.43 |
| KRH15165 | Soybean | cytosol | 53.57 | 55.12 |
| VIT_18s0001g12880.t01 | Wine grape | cytosol | 53.06 | 55.03 |
| GSMUA_Achr3P01150_001 | Banana | cytosol | 35.97 | 54.23 |
| PGSC0003DMT400009594 | Potato | cytosol | 51.79 | 53.85 |
| KRH05855 | Soybean | cytosol | 51.79 | 53.0 |
| Solyc04g080660.2.1 | Tomato | cytosol | 50.0 | 52.41 |
| GSMUA_Achr11P... | Banana | cytosol | 44.64 | 45.22 |
| CDY44851 | Canola | cytosol | 30.1 | 42.75 |
| CDX77965 | Canola | cytosol | 27.81 | 42.41 |
| CDY58433 | Canola | cytosol | 33.93 | 42.22 |
| CDY71401 | Canola | cytosol | 28.57 | 41.95 |
| CDY64928 | Canola | cytosol | 28.57 | 41.95 |
| CDY24787 | Canola | cytosol | 33.67 | 41.9 |
| CDY53070 | Canola | cytosol | 36.22 | 41.64 |
| CDY08522 | Canola | cytosol | 28.83 | 41.09 |
| CDX69227 | Canola | cytosol | 38.52 | 40.81 |
| CDY23695 | Canola | endoplasmic reticulum | 23.47 | 40.71 |
| CDY24788 | Canola | cytosol | 37.5 | 40.5 |
| CDX75578 | Canola | cytosol | 38.01 | 40.27 |
| CDY65325 | Canola | cytosol | 35.71 | 39.89 |
| CDX73874 | Canola | cytosol | 38.78 | 39.69 |
| CDX83129 | Canola | cytosol | 36.48 | 39.39 |
| CDX70229 | Canola | cytosol | 39.29 | 39.19 |
| CDY01018 | Canola | endoplasmic reticulum | 23.72 | 38.75 |
| CDX70230 | Canola | cytosol, plastid | 38.78 | 38.58 |
| CDY44849 | Canola | cytosol | 38.52 | 38.52 |
| CDX70231 | Canola | cytosol | 38.27 | 38.27 |
| CDY27054 | Canola | cytosol | 28.06 | 38.19 |
| CDY53071 | Canola | cytosol | 30.36 | 38.02 |
| CDY51318 | Canola | plastid | 37.5 | 37.89 |
| CDY19749 | Canola | cytosol | 37.76 | 37.76 |
| CDY69068 | Canola | cytosol | 37.5 | 37.69 |
| CDX87021 | Canola | cytosol | 37.5 | 37.5 |
| CDY14232 | Canola | cytosol | 30.1 | 37.11 |
| CDY08520 | Canola | cytosol | 36.22 | 37.08 |
| CDY47999 | Canola | cytosol | 37.24 | 37.06 |
| CDY44848 | Canola | cytosol | 27.3 | 36.9 |
| CDX70232 | Canola | cytosol, plastid | 34.95 | 36.44 |
| CDY01022 | Canola | cytosol | 26.28 | 35.4 |
| CDX73768 | Canola | cytosol | 36.99 | 35.37 |
| CDY54689 | Canola | cytosol | 28.83 | 34.98 |
| CDY67082 | Canola | cytosol, plastid | 22.96 | 33.71 |
| CDY11287 | Canola | cytosol | 36.99 | 29.41 |
| CDY51317 | Canola | mitochondrion | 36.22 | 18.07 |
Protein Annotations
| Gene3D:1.10.1200.270 | MapMan:11.7.3.1 | Gene3D:3.40.50.150 | GO:A0A078HPN2 | UniProt:A0A078HPN2 | EnsemblPlants:CDY39364 |
| ProteinID:CDY39364 | ProteinID:CDY39364.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | EnsemblPlantsGene:GSBRNA2T00067809001 | InterPro:MeTrfase_7 | PFAM:PF03492 |
| PANTHER:PTHR31009 | PANTHER:PTHR31009:SF12 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI0004EC36D7 | SEG:seg |
Description
BnaC05g15230DBnaC05g15230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPN2]
Coordinates
chrLK032446:+:219139..221873
Molecular Weight (calculated)
43583.9 Da
IEP (calculated)
5.062
GRAVY (calculated)
-0.213
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVMRILHMN KGNGETSYAK NSTAQSNIIS QGRRVLDETL KKLMMSSSEI SSFGIADLGC SSGPNSLLSI SNIVDTIQNL CPDLHRPVPE LRVSLNDLPS
101: NDFNYIFASL PEFYDRLKKK ENSNKAALGF QRGGGPCFVS AVPGSFYGRL FPCRSLHFVH SSSSLHWLSQ VPCGEMNNED GVVITTNLDN RGKIYISKTS
201: PESVQKAYAL QFQTDFSAFL RSRSEELVPG GRMVLSFLGR SSPDPTTEEA CFQWELLAQA LMSMANEGII EEENIDAFNA PYYAASSEEL KIAIEKEGSF
301: SIDRLEIIPV DWEGGSISEK SYDIVHSKPE SLTSGRRVAR TIRAVVEPML EPTFGQNVMD ELFERYAKIV GEYLYVSSPR YALIIVSLVR MS
101: NDFNYIFASL PEFYDRLKKK ENSNKAALGF QRGGGPCFVS AVPGSFYGRL FPCRSLHFVH SSSSLHWLSQ VPCGEMNNED GVVITTNLDN RGKIYISKTS
201: PESVQKAYAL QFQTDFSAFL RSRSEELVPG GRMVLSFLGR SSPDPTTEEA CFQWELLAQA LMSMANEGII EEENIDAFNA PYYAASSEEL KIAIEKEGSF
301: SIDRLEIIPV DWEGGSISEK SYDIVHSKPE SLTSGRRVAR TIRAVVEPML EPTFGQNVMD ELFERYAKIV GEYLYVSSPR YALIIVSLVR MS
001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG
Arabidopsis Description
JMTJasmonate O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9AR07]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.