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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96654 Canola cytosol 95.28 96.29
CDX83745 Canola cytosol 96.85 94.13
CDY29416 Canola nucleus 86.61 84.18
CDY44490 Canola cytosol 83.73 84.17
CDY39364 Canola cytosol 86.35 83.93
AT1G19640.1 Thale cress cytosol 85.3 83.55
CDY01397 Canola cytosol 85.3 82.7
CDY39365 Canola endoplasmic reticulum, golgi 54.33 63.89
VIT_18s0001g12900.t01 Wine grape cytosol 55.91 56.8
VIT_18s0001g12890.t01 Wine grape cytosol 40.68 55.36
VIT_18s0001g12880.t01 Wine grape cytosol 54.59 55.03
KRH15165 Soybean cytosol 54.59 54.59
GSMUA_Achr3P01150_001 Banana cytosol 36.75 53.85
PGSC0003DMT400009594 Potato cytosol 52.49 53.05
KRH05855 Soybean cytosol 52.49 52.22
Solyc04g080660.2.1 Tomato cytosol 50.92 51.87
GSMUA_Achr11P... Banana cytosol 46.98 46.25
CDY58433 Canola cytosol 34.91 42.22
CDY44851 Canola cytosol 30.18 41.67
CDY53070 Canola cytosol 37.27 41.64
CDY64928 Canola cytosol 29.13 41.57
CDX77965 Canola cytosol 27.82 41.25
CDY71401 Canola cytosol 28.87 41.2
CDY08522 Canola cytosol 29.66 41.09
CDY24788 Canola cytosol 38.85 40.77
CDY23695 Canola endoplasmic reticulum 24.15 40.71
CDY24787 Canola cytosol 33.33 40.32
CDX69227 Canola cytosol 38.85 40.0
CDX83129 Canola cytosol 38.06 39.94
CDX75578 Canola cytosol 38.06 39.19
CDY01018 Canola endoplasmic reticulum 24.67 39.17
CDX73874 Canola cytosol 39.11 38.9
CDY65325 Canola cytosol 35.7 38.75
CDY53071 Canola cytosol 31.76 38.66
CDX70229 Canola cytosol 39.63 38.42
CDX70230 Canola cytosol, plastid 39.37 38.07
CDY44849 Canola cytosol 38.85 37.76
CDY14232 Canola cytosol 31.5 37.74
CDX70231 Canola cytosol 38.58 37.5
CDY19749 Canola cytosol 38.58 37.5
CDY69068 Canola cytosol 38.32 37.44
CDX87021 Canola cytosol 38.06 36.99
CDY51318 Canola plastid 37.53 36.86
CDY08520 Canola cytosol 37.01 36.81
CDY27054 Canola cytosol 27.82 36.81
CDY44848 Canola cytosol 27.82 36.55
CDY47999 Canola cytosol 37.27 36.04
CDY01022 Canola cytosol 27.03 35.4
CDX70232 Canola cytosol, plastid 34.91 35.37
CDY54689 Canola cytosol 29.66 34.98
CDX73768 Canola cytosol 36.75 34.15
CDY67082 Canola cytosol, plastid 23.1 32.96
CDY11287 Canola cytosol 37.8 29.21
CDY51317 Canola mitochondrion 36.22 17.56
Protein Annotations
EnsemblPlants:CDX83754EnsemblPlantsGene:GSBRNA2T00139492001Gene3D:1.10.1200.270Gene3D:3.40.50.150GO:A0A078D5Y8GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016740InterPro:MeTrfase_7
InterPro:SAM-dependent_MTasesPANTHER:PTHR31009PANTHER:PTHR31009:SF12PFAM:PF03492ProteinID:CDX83754ProteinID:CDX83754.1
SEG:segSUPFAM:SSF53335UniParc:UPI0004EDE9FFMapMan:11.7.3.1::
Description
BnaC08g18910D
Coordinates
chrLK031834:+:266855..269477
Molecular Weight (calculated)
42660.2 Da
IEP (calculated)
5.514
GRAVY (calculated)
-0.176
Length
381 amino acids
Sequence
(BLAST)
001: MEVMRILHMN KGNGETSYAK NSIVQSNIIS LGRRVMDEAL KKLMIRNSEI LSFGIADLGC SSGPNSLLSI SNIVETIQNL CPDLDRPVPE LSLFLNDLPS
101: NDFNYIFASL PEFYDRLKKR DNNYESLGFE HGNGGPCFVS AVPGSFYGRL FPRRSLHFVH SSSSLHWLSQ VPCGEVNKKD GVVITADLDN KGKIYLSKTS
201: PMSAHKAYAL QFQTDFSVFL RSRSEELVPG GRMVLSFLGR SSPDPTTEEG CYQWELLAQA LMSMAKEGII EEENIDAFNA PYYAASPEEL KMAIEKEGSF
301: SIDRLEISPV DWEVRFKPEA LASGRRVAKT IRAVVEPMLE PTFGQKVMDE LFERYAKLVG EYVYVSSPRY AVVIVSLLRM G
Best Arabidopsis Sequence Match ( AT1G19640.1 )
(BLAST)
001: MEVMRVLHMN KGNGETSYAK NSTAQSNIIS LGRRVMDEAL KKLMMSNSEI SSIGIADLGC SSGPNSLLSI SNIVDTIHNL CPDLDRPVPE LRVSLNDLPS
101: NDFNYICASL PEFYDRVNNN KEGLGFGRGG GESCFVSAVP GSFYGRLFPR RSLHFVHSSS SLHWLSQVPC REAEKEDRTI TADLENMGKI YISKTSPKSA
201: HKAYALQFQT DFWVFLRSRS EELVPGGRMV LSFLGRRSLD PTTEESCYQW ELLAQALMSM AKEGIIEEEK IDAFNAPYYA ASSEELKMVI EKEGSFSIDR
301: LEISPIDWEG GSISEESYDL VIRSKPEALA SGRRVSNTIR AVVEPMLEPT FGENVMDELF ERYAKIVGEY FYVSSPRYAI VILSLVRAG
Arabidopsis Description
JMTJasmonate O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9AR07]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.