Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0474866-00 | Rice | cytosol | 11.29 | 8.43 |
| Os12t0297500-01 | Rice | plastid | 16.13 | 0.83 |
| Os06t0498400-01 | Rice | mitochondrion | 17.74 | 0.78 |
| GSMUA_Achr9P25360_001 | Banana | cytosol | 0.0 | 0.0 |
| TraesCS3A01G530400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3A01G530600.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3D01G535900.1 | Wheat | cytosol | 0.0 | 0.0 |
| Zm00001d047697_P002 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os06t0498450-00 | EnsemblPlantsGene:Os06g0498450 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45295 | PFAM:PF00226 | PFscan:PS50076 | ProteinID:BAS97909.1 | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI000393B290 | UniProt:A0A0P0WWX5 | MapMan:35.2 | : | : |
Description
Hypothetical conserved gene. (Os06t0498450-00)
Coordinates
chr6:+:17500677..17501336
Molecular Weight (calculated)
7400.1 Da
IEP (calculated)
10.242
GRAVY (calculated)
-0.498
Length
62 amino acids
Sequence
(BLAST)
(BLAST)
1: RGKAREDYYQ VLGVTVNSTP QEIKEAYRKL QKRHHILILL ATRVMHDYTL LLNEAYKVLM RN
001: MTPAIFSPTT LPPSTATWPC STSQKLITVR SPLKFKCRAT SSSSSITDFD LYDLLGIDRS SDKSQIKSAY RALQKRCHPD IAGDPGHDMA IILNEAYQLL
101: SDPISRQAYD KEQAKLEELR GYTGKPIYSV WCGPETEQRA AFVDEVKCVG CLKCALCAEK TFAIETAYGR ARVVAQWADP ESKIKEAIEA CPVDCISMVE
201: RSDLAPLEFL MSKQPRGNVR IGVGNTVGER VSNVFVDVKK FQERYAKAMS RTTKETSQRE VQISAVEAIR SISNWLYWRS SPYTKPLSPE SNMSLTFTKR
301: KKAVDPDIRK LQDVVAAMKQ ADQSGRTKEK GSAYLLGEDY WSPSNAALPS SGNNNGSKAS SNPQVTRKTF PSEEKPTSRR ENRRQFRIKK FPIGTAIVAV
401: FLVQYQASYR AASELNDHIG GSLALSIVNS PWQQILLAGV TWYFIGAMLL QLVEAVQHKL EDKET
101: SDPISRQAYD KEQAKLEELR GYTGKPIYSV WCGPETEQRA AFVDEVKCVG CLKCALCAEK TFAIETAYGR ARVVAQWADP ESKIKEAIEA CPVDCISMVE
201: RSDLAPLEFL MSKQPRGNVR IGVGNTVGER VSNVFVDVKK FQERYAKAMS RTTKETSQRE VQISAVEAIR SISNWLYWRS SPYTKPLSPE SNMSLTFTKR
301: KKAVDPDIRK LQDVVAAMKQ ADQSGRTKEK GSAYLLGEDY WSPSNAALPS SGNNNGSKAS SNPQVTRKTF PSEEKPTSRR ENRRQFRIKK FPIGTAIVAV
401: FLVQYQASYR AASELNDHIG GSLALSIVNS PWQQILLAGV TWYFIGAMLL QLVEAVQHKL EDKET
Arabidopsis Description
DJC76Chaperone protein dnaJ C76, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.