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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 4
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G530400.1 Wheat cytosol 100.0 100.0
TraesCS3A01G530600.1 Wheat cytosol 100.0 100.0
TraesCS3D01G535900.1 Wheat cytosol 100.0 100.0
TraesCS4A01G167400.1 Wheat cytosol 100.0 100.0
TraesCS4D01G157600.1 Wheat golgi, plastid, unclear 100.0 100.0
GSMUA_Achr9P25360_001 Banana cytosol 98.46 98.46
Zm00001d037059_P005 Maize plastid 24.62 1.09
Zm00001d023792_P005 Maize cytosol 18.46 1.07
Os06t0498450-00 Rice cytosol 0.0 0.0
Protein Annotations
EntrezGene:100280715EntrezGene:100280891EntrezGene:100281083MapMan:17.1.3.1.30Gene3D:2.40.50.140ProteinID:AQL07313.1
ProteinID:AQL07314.1UniProt:B4FW18EMBL:BT041306EMBL:EU952225EMBL:EU952229EMBL:EU953341
EMBL:EU954448EMBL:EU954620EMBL:EU954745EMBL:EU955532EMBL:EU958765EMBL:EU958881
EMBL:EU959057EMBL:EU959543EMBL:EU959786EMBL:EU975151EMBL:EU975344GO:GO:0003674
GO:GO:0003735GO:GO:0005198GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0019538HAMAP:MF_00292InterPro:NA-bd_OB-foldProteinID:ONL97069.1PFAM:PD005541PFAM:PF01200
ScanProsite:PS00961PANTHER:PTHR10769PANTHER:PTHR10769:SF6InterPro:Ribosomal_S28eInterPro:Ribosomal_S28e_CSSUPFAM:SSF50249
UniParc:UPI0000DD9996EnsemblPlantsGene:Zm00001d047697EnsemblPlants:Zm00001d047697_P002EnsemblPlants:Zm00001d047697_T002SEG:seg:
Description
40S ribosomal protein S28
Coordinates
chr9:+:139474060..139475702
Molecular Weight (calculated)
7464.3 Da
IEP (calculated)
11.722
GRAVY (calculated)
-0.429
Length
65 amino acids
Sequence
(BLAST)
1: MDTQVKLAVV VKVMGRTGSR GQVTQVRVKF LDDQNRLIMR NVKGPVREGD ILTLLESERE ARRLR
Best Arabidopsis Sequence Match ( AT3G10090.1 )
(BLAST)
1: MDSQIKHAVV VKVMGRTGSR GQVTQVRVKF TDSDRYIMRN VKGPVREGDI LTLLESEREA RRLR
Arabidopsis Description
RPS28A40S ribosomal protein S28-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.