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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, nucleus, plastid

Predictor Summary:
  • cytosol 5
  • plastid 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, nucleus, plastid
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
plastid: 17189339
extracellular: 18372294
nucleus: 19321431
extracellular: 24083427
nucleus: 24133045
plasma membrane: 27800704
plastid: 27992503
msms PMID: 24133045 doi
DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty
National Institute of Plant Genome Research, New Delhi, India.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19321431 doi
MK Choudhary, D Basu, A Datta, N Chakraborty, S Chakraborty
National Institute of Plant Genome Research, New Delhi, India.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 17189339 doi
T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
msms PMID: 18372294 doi
T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G076150.1 Barley cytosol, extracellular 91.67 91.67
TraesCS7B01G219800.1 Wheat cytosol, plasma membrane 91.67 91.39
TraesCS7D01G315500.1 Wheat golgi 91.37 91.37
TraesCS5A01G483900.1 Wheat cytosol 84.82 91.35
KXG24253 Sorghum cytosol 90.77 91.32
TraesCS7A01G319000.1 Wheat cytosol 91.37 91.1
TraesCS5D01G497600.2 Wheat endoplasmic reticulum, extracellular 45.24 91.02
TraesCS5B01G497500.1 Wheat cytosol 91.07 90.8
TraesCS5B01G497600.1 Wheat cytosol 91.07 90.8
Zm00001d035038_P002 Maize cytosol 90.48 90.75
TraesCS5A01G484100.1 Wheat cytosol 90.18 90.45
TraesCS5A01G484000.1 Wheat cytosol 69.05 90.27
TraesCS3D01G008400.1 Wheat cytosol, plasma membrane 90.48 90.21
Zm00001d035037_P008 Maize cytosol 90.48 89.94
TraesCS5B01G497400.1 Wheat cytosol 89.58 89.32
HORVU5Hr1G114110.1 Barley cytosol 89.29 89.29
GSMUA_Achr3P21740_001 Banana cytosol 79.76 81.96
VIT_18s0089g01230.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 76.19 78.05
GSMUA_Achr6P18400_001 Banana cytosol 75.89 77.74
Solyc11g042850.1.1 Tomato unclear 74.7 77.23
Bra000704.1-P Field mustard cytosol 73.81 76.78
CDX90749 Canola cytosol 73.81 76.78
CDY05089 Canola cytosol 73.21 76.16
AT4G10260.1 Thale cress cytosol 72.62 75.31
KRH34333 Soybean cytosol, nucleus 71.13 73.09
KRG92467 Soybean cytosol, nucleus 70.54 72.48
HORVU1Hr1G083470.2 Barley cytosol, peroxisome 82.44 68.56
Os01t0894300-01 Rice cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 61.31 63.78
Os06t0232200-00 Rice plastid 62.2 52.64
Os01t0851000-01 Rice plastid 33.33 21.09
Os03t0602600-01 Rice nucleus 28.87 16.47
Protein Annotations
MapMan:3.1.4.4Gene3D:3.40.1190.20EntrezGene:4344497EMBL:AB110164EMBL:AK070120EMBL:AK099353
ProteinID:BAD09515.1ProteinID:BAF22751.1ProteinID:BAT03524.1ProteinID:BAT03525.1InterPro:Carboh/pur_kinase_PfkB_CSProteinID:EAZ41295.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005975GO:GO:0006000
GO:GO:0008150GO:GO:0008152GO:GO:0008865GO:GO:0009058GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0016773GO:GO:0019252GO:GO:0046835InterPro:IPR029056
EnsemblPlantsGene:Os08g0113100EnsemblPlants:Os08t0113100-01PFAM:PF00294ScanProsite:PS00583PANTHER:PTHR43085PANTHER:PTHR43085:SF12
InterPro:PfkB_domUniProt:Q0J8G4InterPro:Ribokinase-likeSUPFAM:SSF53613UniParc:UPI00000A3F80RefSeq:XP_015650262.1
SEG:seg:::::
Description
Fructokinase, fructokinase II, Fructokinase 1Similar to Fructokinase (Fragment). (Os08t0113100-01);Similar to cDNA clone:J023041C07, full insert sequence. (Os08t0113100-02)
Coordinates
chr8:+:701252..703992
Molecular Weight (calculated)
35518.4 Da
IEP (calculated)
4.788
GRAVY (calculated)
0.126
Length
336 amino acids
Sequence
(BLAST)
001: MAPLGDGAAA AAAAEPNLVV SFGEMLIDFV PDVAGVSLAE SGGFVKAPGG APANVACAIS KLGGSSAFVG KFGDDEFGHM LVDILKKNGV NAEGCLFDEH
101: ARTALAFVTL KSNGEREFMF YRNPSADMLL TEAELNLDLI RRAKIFHYGS ISLITEPCRS AHVAAMRAAK SAGILCSYDP NVRLPLWPSE DAARAGILSI
201: WKEADFIKVS DDEVAFLTQG DANDEKNVLS LWFDGLKLLI VTDGEKGCRY FTKDFKGSVP GFSVNTVDTT GAGDAFVGSL LVNVAKDDSI FHNEEKLREA
301: LKFSNACGAI CTTKKGAIPA LPTVAVAQEL ISKAAN
Best Arabidopsis Sequence Match ( AT4G10260.1 )
(BLAST)
001: MANTPLIVSF GEMLIDFVPD TSGVSLAEST GFLKAPGGAP ANVACAITKL GGKSAFIGKF GDDEFGHMLV NILKKNGVNS EGVCFDTNAR TALAFVTLKK
101: DGEREFMFYR NPSADMLLKE SELNKDLIKK AKIFHYGSIS LISEPCRTAH MAAMKTAKDA GVLLSYDPNV RLPLWPSTEA AIEGIKSIWN EADIIKVSDD
201: EVTFLTRGDA EKDDVVLSLM HDKLKLLIVT DGEKGCRYYT KKFKGRVPGY AVKAVDTTGA GDSFVGAFLV SLGKDGSILD DEGKLKEALA FANACGAVCT
301: TQKGAIPALP TPADAQKLMK SKSK
Arabidopsis Description
Probable fructokinase-5 [Source:UniProtKB/Swiss-Prot;Acc:O82616]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.