Factsheet for Solyc11g042850.1.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

cytosol 5
extracellular 2
plastid 1
mitochondrion 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

unclear: 26455813

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0089g01230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.08	82.32
Bra000704.1-P	Field mustard	cytosol	79.08	79.57
CDX90749	Canola	cytosol	79.08	79.57
CDY05089	Canola	cytosol	78.77	79.26
AT4G10260.1	Thale cress	cytosol	78.46	78.7
GSMUA_Achr3P21740_001	Banana	cytosol	76.92	76.45
TraesCS5A01G483900.1	Wheat	cytosol	72.31	75.32
TraesCS5A01G484000.1	Wheat	cytosol	59.08	74.71
Os08t0113100-01	Rice	extracellular, nucleus, plastid	77.23	74.7
KRG92467	Soybean	cytosol, nucleus	74.46	74.01
Zm00001d035038_P002	Maize	cytosol	75.69	73.43
KRH34333	Soybean	cytosol, nucleus	73.85	73.39
KXG24253	Sorghum	cytosol	75.38	73.35
TraesCS7D01G315500.1	Wheat	golgi	75.38	72.92
Zm00001d035037_P008	Maize	cytosol	75.69	72.78
GSMUA_Achr6P18400_001	Banana	cytosol	73.23	72.56
TraesCS7A01G319000.1	Wheat	cytosol	75.08	72.4
TraesCS7B01G219800.1	Wheat	cytosol, plasma membrane	75.08	72.4
TraesCS5A01G484100.1	Wheat	cytosol	74.46	72.24
HORVU7Hr1G076150.1	Barley	cytosol, extracellular	74.46	72.02
TraesCS5D01G497600.2	Wheat	endoplasmic reticulum, extracellular	36.92	71.86
TraesCS5B01G497600.1	Wheat	cytosol	74.46	71.81
TraesCS3D01G008400.1	Wheat	cytosol, plasma membrane	74.15	71.51
TraesCS5B01G497500.1	Wheat	cytosol	74.15	71.51
HORVU5Hr1G114110.1	Barley	cytosol	73.85	71.43
TraesCS5B01G497400.1	Wheat	cytosol	73.85	71.22
Solyc06g073190.2.1	Tomato	extracellular	67.38	66.77
Solyc03g006860.2.1	Tomato	cytosol	60.62	56.77
Solyc10g017620.2.1	Tomato	plastid	64.92	56.27
HORVU1Hr1G083470.2	Barley	cytosol, peroxisome	68.62	55.2
Solyc02g091490.2.1	Tomato	plastid	63.69	53.21
Solyc09g011850.2.1	Tomato	nucleus	34.77	23.64
Solyc05g012100.2.1	Tomato	nucleus	30.77	15.5

Protein Annotations

MapMan:3.1.4.4	Gene3D:3.40.1190.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006000	GO:GO:0008150
GO:GO:0008152	GO:GO:0008865	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0046835
InterPro:IPR029056	UniProt:K4D852	PFAM:PF00294	PANTHER:PTHR43085	PANTHER:PTHR43085:SF12	InterPro:PfkB_dom
InterPro:Ribokinase-like	SUPFAM:SSF53613	EnsemblPlantsGene:Solyc11g042850.1	EnsemblPlants:Solyc11g042850.1.1	UniParc:UPI000276A130	:

Description

No Description!

Coordinates

chr11:+:34101089..34103601

Molecular Weight (calculated)

34976.0 Da

IEP (calculated)

6.530

GRAVY (calculated)

-0.059

Length

325 amino acids

Sequence
(BLAST)

001: MSKPAEIVCF GEMLIDFVPD SSGVSLAEST GFLKAPGGAP ANVACAITKL EGTSAFIGKV GDDEFGRMLV DILKSNGVNS EGVLFDKHAR TALAFVTLKK
101: NGEREFMFYR NPSADMLLKD SELNLGLIKQ AKIFHYGSIS LITEPVRSAH MVAMKSAKDA GVLLSYDPNV RLPLWPSPEA AREGIKSIWN EADFIKVSDD
201: EVNFLTQKDA DKEETIMSLW HDRLKLLVVT DGEKGCRYFT KSFKGKVSGF SVKTVDTTGA GDAFVGSLLV SIAKDPSIFQ DEEKLKKALK FSNACGAIST
301: TQKGAIPALP STADAQGLIA GSKAY

Best Arabidopsis Sequence Match ( AT4G10260.1 )
(BLAST)

001: MANTPLIVSF GEMLIDFVPD TSGVSLAEST GFLKAPGGAP ANVACAITKL GGKSAFIGKF GDDEFGHMLV NILKKNGVNS EGVCFDTNAR TALAFVTLKK
101: DGEREFMFYR NPSADMLLKE SELNKDLIKK AKIFHYGSIS LISEPCRTAH MAAMKTAKDA GVLLSYDPNV RLPLWPSTEA AIEGIKSIWN EADIIKVSDD
201: EVTFLTRGDA EKDDVVLSLM HDKLKLLIVT DGEKGCRYYT KKFKGRVPGY AVKAVDTTGA GDSFVGAFLV SLGKDGSILD DEGKLKEALA FANACGAVCT
301: TQKGAIPALP TPADAQKLMK SKSK

Arabidopsis Description

Probable fructokinase-5 [Source:UniProtKB/Swiss-Prot;Acc:O82616]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.