Factsheet for Os03t0602600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 19621931

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os08t0378900-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69200.1	Os08t0378900-02	AT3G06730.1	20511297

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G111500.1	Wheat	plastid	74.02	75.43
EER93838	Sorghum	mitochondrion	74.36	75.13
TraesCS2D01G014800.1	Wheat	plastid	73.34	74.74
HORVU2Hr1G002180.1	Barley	plastid	73.34	74.74
HORVU2Hr1G002260.1	Barley	plastid	73.34	74.74
TraesCS2B01G004000.1	Wheat	plastid	72.67	74.05
HORVU7Hr1G106650.1	Barley	cytosol	23.94	66.51
Zm00001d033181_P001	Maize	plastid	74.02	65.96
HORVU4Hr1G032860.1	Barley	cytosol	35.82	64.13
KRH75089	Soybean	nucleus	48.9	50.26
VIT_01s0011g00240.t01	Wine grape	mitochondrion, plastid	47.71	49.73
KRH70953	Soybean	nucleus	47.37	48.69
CDY54150	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.69	47.03
AT1G69200.1	Thale cress	plastid	46.35	44.46
CDX95956	Canola	plastid	45.5	44.08
Bra004365.1-P	Field mustard	plastid	45.67	43.6
CDY40900	Canola	plastid	45.5	43.51
Solyc05g012100.2.1	Tomato	nucleus	45.33	41.4
PGSC0003DMT400072750	Potato	mitochondrion	45.67	41.38
Os01t0851000-01	Rice	plastid	32.26	35.78
Os01t0894300-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.66	32.2
Os08t0113100-01	Rice	extracellular, nucleus, plastid	16.47	28.87
Os06t0232200-00	Rice	plastid	18.51	27.46

Protein Annotations

MapMan:15.6.1.2.2.12	Gene3D:3.40.1190.20	EntrezGene:4333402	ProteinID:AAT81682.1	ProteinID:BAS85204.1	GO:GO:0000427
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009295
GO:GO:0009536	GO:GO:0009658	GO:GO:0009662	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0042644	GO:GO:0042793	InterPro:IPR029056	EnsemblPlantsGene:Os03g0602600
EnsemblPlants:Os03t0602600-01	PFAM:PF00294	PANTHER:PTHR43085	PANTHER:PTHR43085:SF2	InterPro:PfkB_dom	UniProt:Q6AVL0
InterPro:Ribokinase-like	SUPFAM:SSF53613	UniParc:UPI0000400322	RefSeq:XP_015631645.1	SEG:seg	:

Description

Similar to predicted protein. (Os03t0602600-01)

Coordinates

chr3:+:22547535..22552000

Molecular Weight (calculated)

65550.7 Da

IEP (calculated)

7.053

GRAVY (calculated)

-0.598

Length

589 amino acids

Sequence
(BLAST)

001: MHRMASLLLP PQFLCSLPCS TNSIRSHLHY KPHFLGNIMT KPKAKMRLLN RNVSSMAKKS SQDVAEGSSD DESDGETSKT KKRAPRRGRK KATIQASEGE
101: TQEGQVSTEE DESPEGTKKI KRRGRKKAAT TASSSEEKDK AKEPKKRGRR KVKTVEELSD NEGEDLGEDL VPSNDRQEKI SANDLESKIA ALLLEDTDDN
201: DINNLIPLVC CFGPAKYSFI PSGRPANRLI DHEIHEGMKD MFWSPDQFVR APGGSSSNVA LALAASGGRV EFMGKLGDDD YGQSTLYHLN VNGVQTRAIK
301: MDPSAFTAMS LMKVTGRGSL KMSCAKPCAE DCFVQTDINP AVLKEAKMFY YNSSALLEPT TRSSLSKAIE VSKKFGGVTF FDLNLPLPLW SSSKETKSLV
401: KEAWEAADII EITKQELEFL CGIKPSEKFG TKDNDKSKFT HYSPEVVTKL WHENLKVLFV TNGTSKIHYY TKEHDGWVRG TEDAPITPFT GDMSQSGDAI
501: VAALMKMLAI NPHLVTDKDY LHTAMKHAIT CGVIDQWLLA RERGFLPRER ADPTSEQFGV RFVTEKEYRT LPDSIHTEDS SESELLYVE

Best Arabidopsis Sequence Match ( AT1G69200.1 )
(BLAST)

001: MASLSFTQFL SFPRCNADVP CLLQSHGFVK FRGERWNGKQ SFSMAAGRRK LSESAPLEEE GNDGNGAVVG KKPSKSVKRT TKKKVVVKDE PLEEISEFLV
101: DNDDVLDKES IVSALKPKKT RTRKKAAAAS SDVEEVKTEK KVRRKRTVKK DKDVEDDLAT IMDAEVSDVE EALAVESTDT ESEEEEIDLS KHEGEDISHT
201: YGWPPLVCCF GSAQHAFVPS GRPANRLLDY ELHERMRDAK WAPEKYIRAP GGCAGGVAIA LASLGGKVAF MGKLGADDYG QAMLYYLNVC KVQTRSVKID
301: GKRVTACSTM KISKRGRLKS TCIKPCAEDS LSKSEINVDV LKEAKMFYFS THSLLDKKMM STTIQAIKIS KQLGNVIFYD LNLPLPLWHS SEETKSFIQE
401: VWNLADVIEI TKQELEFLCG IEPTEEFDTE NNDISKFVHY PPETVEQLWH ENLKVLFVTN GTSKIHYYTK EHNGAVSGME DVPITPFTRD MSASGDGIVA
501: GLIRMLTVQP DLMNNKGYLE RTARYAIECG IIDQWLLAQT RGYPPKDDME EEEDDEEEDE VESDPNGIRS ITEKEYRTSK PYDEPDGPYV MKPVEEREYK
601: KLELVGSMFE DGSL

Arabidopsis Description

FLN2Fructokinase-like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I0K2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.