Factsheet for HORVU7Hr1G106650.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G012560.15

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69200.1	HORVU4Hr1G012560.15	AT3G06730.1	20511297

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G032860.1	Barley	cytosol	61.32	39.51
HORVU2Hr1G002180.1	Barley	plastid	82.55	30.28
HORVU2Hr1G002260.1	Barley	plastid	82.55	30.28
TraesCS2D01G014800.1	Wheat	plastid	79.72	29.24
TraesCS2B01G004000.1	Wheat	plastid	77.83	28.55
TraesCS2A01G111500.1	Wheat	plastid	77.83	28.55
EER93838	Sorghum	mitochondrion	67.45	24.53
Os03t0602600-01	Rice	nucleus	66.51	23.94
Zm00001d033181_P001	Maize	plastid	66.04	21.18
CDY54150	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.09	18.01
KRH75089	Soybean	nucleus	48.11	17.8
KRH70953	Soybean	nucleus	47.64	17.63
VIT_01s0011g00240.t01	Wine grape	mitochondrion, plastid	45.75	17.17
CDX95956	Canola	plastid	43.4	15.13
Solyc05g012100.2.1	Tomato	nucleus	45.75	15.04
AT1G69200.1	Thale cress	plastid	43.4	14.98
PGSC0003DMT400072750	Potato	mitochondrion	45.75	14.92
Bra004365.1-P	Field mustard	plastid	43.4	14.91
CDY40900	Canola	plastid	42.92	14.77
HORVU5Hr1G076230.5	Barley	plastid	24.06	14.25
HORVU7Hr1G076150.1	Barley	cytosol, extracellular	21.23	13.39
HORVU5Hr1G114110.1	Barley	cytosol	19.81	12.5
HORVU1Hr1G083470.2	Barley	cytosol, peroxisome	21.23	11.14
HORVU7Hr1G038710.2	Barley	cytosol, plastid	19.81	9.46

Protein Annotations

EnsemblPlants:HORVU7Hr1G106650.1	EnsemblPlantsGene:HORVU7Hr1G106650	Gene3D:3.40.1190.20	InterPro:IPR029056	InterPro:PfkB_dom	InterPro:Ribokinase-like
PANTHER:PTHR43085	PANTHER:PTHR43085:SF2	PFAM:PF00294	SEG:seg	SUPFAM:SSF53613	UniParc:UPI000B461106
UniProt:A0A287XP62	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:620326725..620328408

Molecular Weight (calculated)

23608.5 Da

IEP (calculated)

6.663

GRAVY (calculated)

-0.140

Length

212 amino acids

Sequence
(BLAST)

001: MPSNEIELHS SVNGLESKVE ALLSQDTGEI DKLTPLVCCF GPAKYSFIPS GRPTNRLVDR EIHNRMKDMF WSPDEFVRAP GGSSSNIALA LAALGGQVVF
101: MGKLGDDEYG QSMLYHLNMN GVQTRAVSLD PSAPTHMPLM KVTSRGSLNT SCVKSCAVDC FQQSDINPDV LKEQSDINPD VLKEKVFLLT LFFRQRIQKY
201: LQFLLFPHRL VL

Best Arabidopsis Sequence Match ( AT1G69200.1 )
(BLAST)

001: MASLSFTQFL SFPRCNADVP CLLQSHGFVK FRGERWNGKQ SFSMAAGRRK LSESAPLEEE GNDGNGAVVG KKPSKSVKRT TKKKVVVKDE PLEEISEFLV
101: DNDDVLDKES IVSALKPKKT RTRKKAAAAS SDVEEVKTEK KVRRKRTVKK DKDVEDDLAT IMDAEVSDVE EALAVESTDT ESEEEEIDLS KHEGEDISHT
201: YGWPPLVCCF GSAQHAFVPS GRPANRLLDY ELHERMRDAK WAPEKYIRAP GGCAGGVAIA LASLGGKVAF MGKLGADDYG QAMLYYLNVC KVQTRSVKID
301: GKRVTACSTM KISKRGRLKS TCIKPCAEDS LSKSEINVDV LKEAKMFYFS THSLLDKKMM STTIQAIKIS KQLGNVIFYD LNLPLPLWHS SEETKSFIQE
401: VWNLADVIEI TKQELEFLCG IEPTEEFDTE NNDISKFVHY PPETVEQLWH ENLKVLFVTN GTSKIHYYTK EHNGAVSGME DVPITPFTRD MSASGDGIVA
501: GLIRMLTVQP DLMNNKGYLE RTARYAIECG IIDQWLLAQT RGYPPKDDME EEEDDEEEDE VESDPNGIRS ITEKEYRTSK PYDEPDGPYV MKPVEEREYK
601: KLELVGSMFE DGSL

Arabidopsis Description

FLN2Fructokinase-like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I0K2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.