Factsheet for PGSC0003DMT400072750

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400013827

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69200.1	PGSC0003DMT400013827	AT3G06730.1	20511297

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g012100.2.1	Tomato	nucleus	94.15	94.88
VIT_01s0011g00240.t01	Wine grape	mitochondrion, plastid	54.92	63.19
KRH70953	Soybean	nucleus	52.62	59.69
KRH75089	Soybean	nucleus	52.62	59.69
CDY54150	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.31	58.26
CDX95956	Canola	plastid	51.38	54.93
Bra004365.1-P	Field mustard	plastid	51.38	54.13
AT1G69200.1	Thale cress	plastid	50.77	53.75
CDY40900	Canola	plastid	50.62	53.41
HORVU4Hr1G032860.1	Barley	cytosol	23.54	46.5
EER93838	Sorghum	mitochondrion	41.54	46.31
PGSC0003DMT400052461	Potato	cytosol	27.38	45.88
HORVU7Hr1G106650.1	Barley	cytosol	14.92	45.75
TraesCS2D01G014800.1	Wheat	plastid	40.62	45.67
Os03t0602600-01	Rice	nucleus	41.38	45.67
TraesCS2B01G004000.1	Wheat	plastid	40.31	45.33
HORVU2Hr1G002260.1	Barley	plastid	40.15	45.16
HORVU2Hr1G002180.1	Barley	plastid	40.15	45.16
TraesCS2A01G111500.1	Wheat	plastid	39.85	44.81
Zm00001d033181_P001	Maize	plastid	41.23	40.54
PGSC0003DMT400069198	Potato	extracellular	17.08	33.74
PGSC0003DMT400062304	Potato	cytosol	17.38	32.56
PGSC0003DMT400078780	Potato	plastid	17.08	28.53
PGSC0003DMT400026605	Potato	plastid	16.46	27.79

Protein Annotations

EntrezGene:102589995	MapMan:15.6.1.2.2.12	Gene3D:3.40.1190.20	ncoils:Coil	GO:GO:0000427	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009295	GO:GO:0009536	GO:GO:0009658	GO:GO:0009662
GO:GO:0009987	GO:GO:0016043	GO:GO:0042644	GO:GO:0042793	InterPro:IPR029056	UniProt:M1CQW1
PFAM:PF00294	EnsemblPlantsGene:PGSC0003DMG400028311	PGSC:PGSC0003DMG400028311	EnsemblPlants:PGSC0003DMT400072750	PANTHER:PTHR43085	PANTHER:PTHR43085:SF2
InterPro:PfkB_dom	InterPro:Ribokinase-like	SUPFAM:SSF53613	UniParc:UPI000296A334	RefSeq:XP_006348670.1	SEG:seg

Description

Fructokinase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400028311]

Coordinates

chr5:-:687342..692019

Molecular Weight (calculated)

72949.3 Da

IEP (calculated)

5.995

GRAVY (calculated)

-0.639

Length

650 amino acids

Sequence
(BLAST)

001: MAALSFSFFS TLSRQHLHWN FYPTMKVMQL QDLKLKNKWV LMAVSKEGTP EGITEELSET EVVGAGKKTG RTSKRAPVSS RRKKVIEPSD DDPVNDEEAE
101: NTSGSVEEPK KIRRRTRKKK ETVESSYGDS ISDVEGNVTD EEAVTEPESS GKPKKTRRTR KKKETVESSF EDFMLGEEGN VTEEEGLPTS GSSQEPIEKR
201: KRTSKKAASS SSSLEKEPTQ KATRGRRKKV NNLEDEGSQT EVSDIEEELH VANVDADNEE ELDFDIDVGE DISFTYGWPP LVCCFGAAQH AFVPSGRPSN
301: RLVDHEWHER MKDVMWDPEK FIRAPGGCSS NVAVALASLG GKVAFMGKLG DDDFGQSLVY FMNINKVQTR SVRLDSKRAT AITHMKIGKR GGLRMTTTKP
401: CAEDSLLKSE INIDVLKEAK MFYFNTFSLL DPNMRLTTLR ATKISKKLGG VVFYDLNLPS PLWESGEKAK TFIQKAWNLA DIIEVTKQEL EFLCGIEPSE
501: KFDTKDNDRS KFTHYPPEVI APLWHENLKI LFVTNGTSKI HYYTKEHNGS VLGLEDVPLS PYTSDMSASG DGIIAGIIRM LTVQPHLMTD KGYLERTLKY
601: AISCGVVDQW LQARRLGYPP KEGMEDDVVP DDHGIRSVTE REYRTLVPVS

Best Arabidopsis Sequence Match ( AT1G69200.1 )
(BLAST)

001: MASLSFTQFL SFPRCNADVP CLLQSHGFVK FRGERWNGKQ SFSMAAGRRK LSESAPLEEE GNDGNGAVVG KKPSKSVKRT TKKKVVVKDE PLEEISEFLV
101: DNDDVLDKES IVSALKPKKT RTRKKAAAAS SDVEEVKTEK KVRRKRTVKK DKDVEDDLAT IMDAEVSDVE EALAVESTDT ESEEEEIDLS KHEGEDISHT
201: YGWPPLVCCF GSAQHAFVPS GRPANRLLDY ELHERMRDAK WAPEKYIRAP GGCAGGVAIA LASLGGKVAF MGKLGADDYG QAMLYYLNVC KVQTRSVKID
301: GKRVTACSTM KISKRGRLKS TCIKPCAEDS LSKSEINVDV LKEAKMFYFS THSLLDKKMM STTIQAIKIS KQLGNVIFYD LNLPLPLWHS SEETKSFIQE
401: VWNLADVIEI TKQELEFLCG IEPTEEFDTE NNDISKFVHY PPETVEQLWH ENLKVLFVTN GTSKIHYYTK EHNGAVSGME DVPITPFTRD MSASGDGIVA
501: GLIRMLTVQP DLMNNKGYLE RTARYAIECG IIDQWLLAQT RGYPPKDDME EEEDDEEEDE VESDPNGIRS ITEKEYRTSK PYDEPDGPYV MKPVEEREYK
601: KLELVGSMFE DGSL

Arabidopsis Description

FLN2Fructokinase-like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I0K2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.