Factsheet for TraesCS2A01G111500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G240000.1
TraesCS4B01G074900.1
TraesCS4D01G073500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69200.1	TraesCS4A01G240000.1	AT3G06730.1	20511297
AT1G69200.1	TraesCS4B01G074900.1	AT3G06730.1	20511297
AT1G69200.1	TraesCS4D01G073500.1	AT3G06730.1	20511297

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G014800.1	Wheat	plastid	95.5	95.5
TraesCS2B01G004000.1	Wheat	plastid	94.81	94.81
HORVU2Hr1G002180.1	Barley	plastid	94.12	94.12
HORVU2Hr1G002260.1	Barley	plastid	94.12	94.12
HORVU7Hr1G106650.1	Barley	cytosol	28.55	77.83
Os03t0602600-01	Rice	nucleus	75.43	74.02
EER93838	Sorghum	mitochondrion	74.05	73.41
HORVU4Hr1G032860.1	Barley	cytosol	41.0	72.04
Zm00001d033181_P001	Maize	plastid	72.66	63.54
KRH75089	Soybean	nucleus	47.58	47.99
KRH70953	Soybean	nucleus	46.89	47.29
VIT_01s0011g00240.t01	Wine grape	mitochondrion, plastid	46.19	47.26
CDY54150	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.72	46.19
CDX95956	Canola	plastid	45.33	43.09
AT1G69200.1	Thale cress	plastid	45.67	43.0
Bra004365.1-P	Field mustard	plastid	45.67	42.79
CDY40900	Canola	plastid	45.33	42.53
Solyc05g012100.2.1	Tomato	nucleus	44.98	40.31
PGSC0003DMT400072750	Potato	mitochondrion	44.81	39.85
TraesCS3A01G365700.1	Wheat	plastid	32.01	35.44
TraesCS3A01G400000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.34	32.82
TraesCS5A01G286200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.99	32.2
TraesCS7A01G319000.1	Wheat	cytosol	16.09	27.6
TraesCS5A01G483900.1	Wheat	cytosol	14.88	27.56
TraesCS7A01G190500.1	Wheat	plastid	18.17	27.34
TraesCS5A01G484100.1	Wheat	cytosol	15.57	26.87
TraesCS5A01G484000.1	Wheat	cytosol	10.38	23.35

Protein Annotations

MapMan:15.6.1.2.2.12	Gene3D:3.40.1190.20	GO:GO:0000427	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009295	GO:GO:0009536	GO:GO:0009658	GO:GO:0009662	GO:GO:0009987	GO:GO:0016043
GO:GO:0042644	GO:GO:0042793	InterPro:IPR029056	PFAM:PF00294	PANTHER:PTHR43085	PANTHER:PTHR43085:SF2
InterPro:PfkB_dom	InterPro:Ribokinase-like	SUPFAM:SSF53613	EnsemblPlantsGene:TraesCS2A01G111500	EnsemblPlants:TraesCS2A01G111500.1	TIGR:cd01167
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:62698758..62702336

Molecular Weight (calculated)

64035.1 Da

IEP (calculated)

6.879

GRAVY (calculated)

-0.563

Length

578 amino acids

Sequence
(BLAST)

001: MASLLLPPQF ACSLPYYCIR GQLHYKPTIW GKNMTKTKMG LLHRNVSFVS KKSSQDVEEG SSGEDSDAET PKTKKKPAKR GRKKATVDAS EGETQEAQSD
101: TEDASPEEPK IVKKRGRKKA ATTASSPEEA DKPKEPKKRG RRKVKVAEQL SDDEGEDQSK DLMPSTEMEV HSSANDLESK VEALLSQDIE EVDKLVPLVC
201: CFGPAKYSFI PSGRPAKRLV DREIHSRMKD MFWSPDEFVR APGGSSSNVA LALAALGGRV VFMGKLGDDE YGQSMLYHLN VNGVQTRAVS LDPSAPTAMS
301: LMKVTSRGSL NTSCVKPCAE DCFLQSDINP DVLKEAKMFY YNSSALLEPT TRTSLLKAIE VSKKFSGITF FDLNLPMPLW SSSKETKSLI KEAWEAADII
401: EVTKQELEFL CGIKPSENSD TKDEKSEFAH YSPEVVMKLW HGNLKVLFVT NGTSKIHYYT EKHNGSVRGT EDAPITPFTS EMSQSGDTIA AALMNMLSIN
501: PHLVRDKVYL HKTAKHAIKC GVIDQWLAAR ERGFLPRGIA EPSSEHEEAR FITEREYRTI PDAMQPANPS GSELAHVE

Best Arabidopsis Sequence Match ( AT1G69200.1 )
(BLAST)

001: MASLSFTQFL SFPRCNADVP CLLQSHGFVK FRGERWNGKQ SFSMAAGRRK LSESAPLEEE GNDGNGAVVG KKPSKSVKRT TKKKVVVKDE PLEEISEFLV
101: DNDDVLDKES IVSALKPKKT RTRKKAAAAS SDVEEVKTEK KVRRKRTVKK DKDVEDDLAT IMDAEVSDVE EALAVESTDT ESEEEEIDLS KHEGEDISHT
201: YGWPPLVCCF GSAQHAFVPS GRPANRLLDY ELHERMRDAK WAPEKYIRAP GGCAGGVAIA LASLGGKVAF MGKLGADDYG QAMLYYLNVC KVQTRSVKID
301: GKRVTACSTM KISKRGRLKS TCIKPCAEDS LSKSEINVDV LKEAKMFYFS THSLLDKKMM STTIQAIKIS KQLGNVIFYD LNLPLPLWHS SEETKSFIQE
401: VWNLADVIEI TKQELEFLCG IEPTEEFDTE NNDISKFVHY PPETVEQLWH ENLKVLFVTN GTSKIHYYTK EHNGAVSGME DVPITPFTRD MSASGDGIVA
501: GLIRMLTVQP DLMNNKGYLE RTARYAIECG IIDQWLLAQT RGYPPKDDME EEEDDEEEDE VESDPNGIRS ITEKEYRTSK PYDEPDGPYV MKPVEEREYK
601: KLELVGSMFE DGSL

Arabidopsis Description

FLN2Fructokinase-like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I0K2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.