Factsheet for TraesCS2B01G004000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G240000.1
TraesCS4B01G074900.1
TraesCS4D01G073500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69200.1	TraesCS4A01G240000.1	AT3G06730.1	20511297
AT1G69200.1	TraesCS4B01G074900.1	AT3G06730.1	20511297
AT1G69200.1	TraesCS4D01G073500.1	AT3G06730.1	20511297

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G014800.1	Wheat	plastid	96.02	96.02
TraesCS2A01G111500.1	Wheat	plastid	94.81	94.81
HORVU2Hr1G002180.1	Barley	plastid	93.43	93.43
HORVU2Hr1G002260.1	Barley	plastid	93.43	93.43
HORVU7Hr1G106650.1	Barley	cytosol	28.55	77.83
EER93838	Sorghum	mitochondrion	73.53	72.9
Os03t0602600-01	Rice	nucleus	74.05	72.67
HORVU4Hr1G032860.1	Barley	cytosol	40.83	71.73
Zm00001d033181_P001	Maize	plastid	72.49	63.39
KRH75089	Soybean	nucleus	47.23	47.64
VIT_01s0011g00240.t01	Wine grape	mitochondrion, plastid	46.54	47.61
KRH70953	Soybean	nucleus	46.54	46.95
CDY54150	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.72	46.19
CDX95956	Canola	plastid	45.33	43.09
AT1G69200.1	Thale cress	plastid	45.67	43.0
Bra004365.1-P	Field mustard	plastid	45.67	42.79
CDY40900	Canola	plastid	45.33	42.53
PGSC0003DMT400072750	Potato	mitochondrion	45.33	40.31
Solyc05g012100.2.1	Tomato	nucleus	44.46	39.84
TraesCS3B01G397500.1	Wheat	plastid	32.35	35.69
TraesCS3B01G433000.1	Wheat	golgi	18.17	32.51
TraesCS5B01G285500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.99	32.2
TraesCS7B01G219800.1	Wheat	cytosol, plasma membrane	16.26	27.89
TraesCS5B01G497400.1	Wheat	cytosol	16.09	27.6
TraesCS5B01G497500.1	Wheat	cytosol	16.09	27.6
TraesCS7B01G095400.1	Wheat	plastid	18.17	27.34
TraesCS5B01G497600.1	Wheat	cytosol	15.92	27.3

Protein Annotations

MapMan:15.6.1.2.2.12	Gene3D:3.40.1190.20	ncoils:Coil	GO:GO:0000427	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009295	GO:GO:0009536	GO:GO:0009658	GO:GO:0009662	GO:GO:0009987
GO:GO:0016043	GO:GO:0042644	GO:GO:0042793	InterPro:IPR029056	PFAM:PF00294	PANTHER:PTHR43085
PANTHER:PTHR43085:SF2	InterPro:PfkB_dom	InterPro:Ribokinase-like	SUPFAM:SSF53613	EnsemblPlantsGene:TraesCS2B01G004000	EnsemblPlants:TraesCS2B01G004000.1
TIGR:cd01167	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:2109765..2112796

Molecular Weight (calculated)

64016.0 Da

IEP (calculated)

7.180

GRAVY (calculated)

-0.574

Length

578 amino acids

Sequence
(BLAST)

001: MASLLLPPQF ACSLPYYCIR GQLHYKPTIW RKNAAKTKIG LLHRNVSFVS KKTSQDVEEG SSGEDSDTET PKAKKKPAKR GRKKATIDTS DGDTKEGQSD
101: TEDASPKEPK IVKKRGRKKA ATTASSAEEA DKPKEPKKRG RRKVKTAEQL SDDEGDDQSK DLMPSNEMEV HSSAGDLESK VEALLSQDIE EVDKLMPLVC
201: CFGPAKYLFI PSGRPAKRLV DREIHSRMKD MFWSPDEFVR APGGSSSNVA LALAALGGRV VFMGKLGDDE YGQSMLYHLN VNGVQTRAVS LDPSAPTAMS
301: LMKVTNRGSL NTSCVKPCAE DCFQQSDINP DVLKEAKMFY YNSSALLEPT TRSSLLKAIE VSKKFGGITF FDLNLPMPLW SSSKETKSLI KEAWEAADII
401: EVTKQELEFL CGIKPSENSD AKDEKSEFAH YSPEVVMKIW HDNLKVLFVT NGTSKIHYYT EKHNGSVRGT EDAPITPFTS EMSQSGDTIA AALMNMLSIN
501: PHLVTDKVYL HKTAKHAIKC GVIDQWLAAR ERGFLPRGIA EPSSEHEEAR FITEREYRTI PDAMQPVNPS GSELAHVE

Best Arabidopsis Sequence Match ( AT1G69200.1 )
(BLAST)

001: MASLSFTQFL SFPRCNADVP CLLQSHGFVK FRGERWNGKQ SFSMAAGRRK LSESAPLEEE GNDGNGAVVG KKPSKSVKRT TKKKVVVKDE PLEEISEFLV
101: DNDDVLDKES IVSALKPKKT RTRKKAAAAS SDVEEVKTEK KVRRKRTVKK DKDVEDDLAT IMDAEVSDVE EALAVESTDT ESEEEEIDLS KHEGEDISHT
201: YGWPPLVCCF GSAQHAFVPS GRPANRLLDY ELHERMRDAK WAPEKYIRAP GGCAGGVAIA LASLGGKVAF MGKLGADDYG QAMLYYLNVC KVQTRSVKID
301: GKRVTACSTM KISKRGRLKS TCIKPCAEDS LSKSEINVDV LKEAKMFYFS THSLLDKKMM STTIQAIKIS KQLGNVIFYD LNLPLPLWHS SEETKSFIQE
401: VWNLADVIEI TKQELEFLCG IEPTEEFDTE NNDISKFVHY PPETVEQLWH ENLKVLFVTN GTSKIHYYTK EHNGAVSGME DVPITPFTRD MSASGDGIVA
501: GLIRMLTVQP DLMNNKGYLE RTARYAIECG IIDQWLLAQT RGYPPKDDME EEEDDEEEDE VESDPNGIRS ITEKEYRTSK PYDEPDGPYV MKPVEEREYK
601: KLELVGSMFE DGSL

Arabidopsis Description

FLN2Fructokinase-like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I0K2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.