Factsheet for HORVU4Hr1G032860.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G012560.15

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69200.1	HORVU4Hr1G012560.15	AT3G06730.1	20511297

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G106650.1	Barley	cytosol	39.51	61.32
HORVU2Hr1G002180.1	Barley	plastid	75.38	42.91
HORVU2Hr1G002260.1	Barley	plastid	75.38	42.91
TraesCS2D01G014800.1	Wheat	plastid	72.04	41.0
TraesCS2A01G111500.1	Wheat	plastid	72.04	41.0
TraesCS2B01G004000.1	Wheat	plastid	71.73	40.83
EER93838	Sorghum	mitochondrion	64.13	36.19
Os03t0602600-01	Rice	nucleus	64.13	35.82
CDY54150	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.63	33.9
Zm00001d033181_P001	Maize	plastid	63.53	31.62
KRH75089	Soybean	nucleus	48.33	27.75
VIT_01s0011g00240.t01	Wine grape	mitochondrion, plastid	47.42	27.61
KRH70953	Soybean	nucleus	47.11	27.05
CDX95956	Canola	plastid	44.68	24.18
Bra004365.1-P	Field mustard	plastid	44.68	23.82
CDY40900	Canola	plastid	44.38	23.7
Solyc05g012100.2.1	Tomato	nucleus	46.2	23.57
PGSC0003DMT400072750	Potato	mitochondrion	46.5	23.54
AT1G69200.1	Thale cress	plastid	43.47	23.29
HORVU5Hr1G076230.5	Barley	plastid	24.92	22.91
HORVU7Hr1G076150.1	Barley	cytosol, extracellular	21.88	21.43
HORVU5Hr1G114110.1	Barley	cytosol	20.97	20.54
HORVU1Hr1G083470.2	Barley	cytosol, peroxisome	21.88	17.82
HORVU7Hr1G038710.2	Barley	cytosol, plastid	22.19	16.44

Protein Annotations

EnsemblPlants:HORVU4Hr1G032860.1	EnsemblPlantsGene:HORVU4Hr1G032860	Gene3D:3.40.1190.20	InterPro:IPR029056	InterPro:PfkB_dom	InterPro:Ribokinase-like
ncoils:Coil	PANTHER:PTHR43085	PANTHER:PTHR43085:SF2	PFAM:PF00294	SEG:seg	SUPFAM:SSF53613
UniParc:UPI000B46E527	UniProt:A0A287NR09	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:225857299..225859320

Molecular Weight (calculated)

29940.1 Da

IEP (calculated)

6.364

GRAVY (calculated)

-0.109

Length

329 amino acids

Sequence
(BLAST)

001: MQLMFFHVMS EFLNPXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXS FIPSGRPANR LVDREIHSRM KDMFWSPDEF VRAPGGSSSN VALALAALGG
101: RVVFMGKLGD DEYGQSMLYH LNMNGVQTRA VSLDPSAPTA MSLMKVTSRG SLNTSCVKSC AEDCFQQSDI NPDVLKEAKM FYYNSSALLE ATTRSSLLKA
201: IEVSKKFGGI TFFDLNLPMP LWSSSKEAKS LIKEAWEAAD IIEVTKQELE FLCGIKPSGK SDTKDEKSEF AHYSPEVVMK LWHANLKVLX XXXXXXXXXX
301: XXXXXXXXXX XXXXAGVIPF SKKVDLDDI

Best Arabidopsis Sequence Match ( AT1G69200.1 )
(BLAST)

001: MASLSFTQFL SFPRCNADVP CLLQSHGFVK FRGERWNGKQ SFSMAAGRRK LSESAPLEEE GNDGNGAVVG KKPSKSVKRT TKKKVVVKDE PLEEISEFLV
101: DNDDVLDKES IVSALKPKKT RTRKKAAAAS SDVEEVKTEK KVRRKRTVKK DKDVEDDLAT IMDAEVSDVE EALAVESTDT ESEEEEIDLS KHEGEDISHT
201: YGWPPLVCCF GSAQHAFVPS GRPANRLLDY ELHERMRDAK WAPEKYIRAP GGCAGGVAIA LASLGGKVAF MGKLGADDYG QAMLYYLNVC KVQTRSVKID
301: GKRVTACSTM KISKRGRLKS TCIKPCAEDS LSKSEINVDV LKEAKMFYFS THSLLDKKMM STTIQAIKIS KQLGNVIFYD LNLPLPLWHS SEETKSFIQE
401: VWNLADVIEI TKQELEFLCG IEPTEEFDTE NNDISKFVHY PPETVEQLWH ENLKVLFVTN GTSKIHYYTK EHNGAVSGME DVPITPFTRD MSASGDGIVA
501: GLIRMLTVQP DLMNNKGYLE RTARYAIECG IIDQWLLAQT RGYPPKDDME EEEDDEEEDE VESDPNGIRS ITEKEYRTSK PYDEPDGPYV MKPVEEREYK
601: KLELVGSMFE DGSL

Arabidopsis Description

FLN2Fructokinase-like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I0K2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.