CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES14934

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69200.1	EES14934	AT3G06730.1	20511297

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033181_P001	Maize	plastid	89.71	79.12
Os03t0602600-01	Rice	nucleus	75.13	74.36
TraesCS2D01G014800.1	Wheat	plastid	73.41	74.05
TraesCS2A01G111500.1	Wheat	plastid	73.41	74.05
TraesCS2B01G004000.1	Wheat	plastid	72.9	73.53
HORVU2Hr1G002180.1	Barley	plastid	72.9	73.53
HORVU2Hr1G002260.1	Barley	plastid	72.9	73.53
HORVU7Hr1G106650.1	Barley	cytosol	24.53	67.45
HORVU4Hr1G032860.1	Barley	cytosol	36.19	64.13
KRH75089	Soybean	nucleus	49.4	50.26
VIT_01s0011g00240.t01	Wine grape	mitochondrion, plastid	48.2	49.73
KRH70953	Soybean	nucleus	47.51	48.34
CDY54150	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.77	47.88
CDX95956	Canola	plastid	45.63	43.75
AT1G69200.1	Thale cress	plastid	45.63	43.32
Bra004365.1-P	Field mustard	plastid	45.8	43.27
CDY40900	Canola	plastid	45.63	43.18
Solyc05g012100.2.1	Tomato	nucleus	46.14	41.71
PGSC0003DMT400072750	Potato	mitochondrion	46.31	41.54
OQU87871	Sorghum	plastid	31.39	34.92
EES04029	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.5	31.58
KXG24253	Sorghum	cytosol	16.81	29.34
EER88127	Sorghum	plastid	18.35	27.58

Protein Annotations

MapMan:15.6.1.2.2.12	Gene3D:3.40.1190.20	EntrezGene:8064522	UniProt:C5WT84	EnsemblPlants:EER93838	ProteinID:EER93838
ProteinID:EER93838.1	GO:GO:0000427	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009295
GO:GO:0009536	GO:GO:0009658	GO:GO:0009662	GO:GO:0009987	GO:GO:0016043	GO:GO:0042644
GO:GO:0042793	InterPro:IPR029056	ProteinID:OQU91397.1	ProteinID:OQU91398.1	PFAM:PF00294	PANTHER:PTHR43085
PANTHER:PTHR43085:SF2	InterPro:PfkB_dom	InterPro:Ribokinase-like	EnsemblPlantsGene:SORBI_3001G172300	SUPFAM:SSF53613	UniParc:UPI0001A82C67
RefSeq:XP_002466840.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:14424974..14430902

Molecular Weight (calculated)

65024.4 Da

IEP (calculated)

6.879

GRAVY (calculated)

-0.508

Length

583 amino acids

Sequence
(BLAST)

001: MASLLLPPQF TCSLRPYHRI RGQLVHYKTN ILGKDVTKST VKFLNLTANF ASRTSQDAVD GLSDESDGES STNKKRAPRR GRKKATTEIS GGEGEGNQII
101: TEETAAGETK EVKRRGRKKA AVAASSEEEK DKAKEPKKRG RRKVKTVEES SDDDGEHRSK DLMLYNEGED QTQLLNSANV LESKIELVLH EDIGEVDDLI
201: PLVCCFGPAK YSFIPSGRPA NRLIDHEIHD RMKDMFWSPD KFVRAPGGSS PNVALALAAI GGRVAFMGKL GDDDYGQSLL YHLNINGVQT RAVCMDPSAP
301: TAVSLMKVRT EGSLKTNCVK PCAEDCFLQS DINPAVLKEA KMFYYNSSAL LEPTTESSLL KAIDVSKKFG GTIFFDLNLP LPLWSSSKET KLLIKEAWEA
401: ADIIEVTKQE LEFLCGIKPS EKFDTNDNDK SKFTHYSPEV IMKLWHNNLK VLFVTNGTSK IHYYTEKHNG WVRGTEDAPI TPFTSDMSQS GDAIVAALMR
501: MLIINPHLVT DKVYLHKAVK HAIKCGVIDQ WMLARERGFL PKERADPTSE QYEVRSITEK EYRTLPDAMQ SENSSTSELA YVE

Best Arabidopsis Sequence Match ( AT1G69200.1 )
(BLAST)

001: MASLSFTQFL SFPRCNADVP CLLQSHGFVK FRGERWNGKQ SFSMAAGRRK LSESAPLEEE GNDGNGAVVG KKPSKSVKRT TKKKVVVKDE PLEEISEFLV
101: DNDDVLDKES IVSALKPKKT RTRKKAAAAS SDVEEVKTEK KVRRKRTVKK DKDVEDDLAT IMDAEVSDVE EALAVESTDT ESEEEEIDLS KHEGEDISHT
201: YGWPPLVCCF GSAQHAFVPS GRPANRLLDY ELHERMRDAK WAPEKYIRAP GGCAGGVAIA LASLGGKVAF MGKLGADDYG QAMLYYLNVC KVQTRSVKID
301: GKRVTACSTM KISKRGRLKS TCIKPCAEDS LSKSEINVDV LKEAKMFYFS THSLLDKKMM STTIQAIKIS KQLGNVIFYD LNLPLPLWHS SEETKSFIQE
401: VWNLADVIEI TKQELEFLCG IEPTEEFDTE NNDISKFVHY PPETVEQLWH ENLKVLFVTN GTSKIHYYTK EHNGAVSGME DVPITPFTRD MSASGDGIVA
501: GLIRMLTVQP DLMNNKGYLE RTARYAIECG IIDQWLLAQT RGYPPKDDME EEEDDEEEDE VESDPNGIRS ITEKEYRTSK PYDEPDGPYV MKPVEEREYK
601: KLELVGSMFE DGSL

Arabidopsis Description

FLN2Fructokinase-like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I0K2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.