CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042847_P001	Maize	plastid	92.56	93.09
Os01t0851000-01	Rice	plastid	82.63	81.54
TraesCS3A01G365700.1	Wheat	plastid	79.77	80.08
TraesCS3D01G358800.1	Wheat	plastid	79.96	79.66
TraesCS3B01G397500.1	Wheat	plastid	79.2	79.2
CDX78206	Canola	cytosol	50.19	69.58
Bra007044.1-P	Field mustard	cytosol	50.0	69.31
PGSC0003DMT400052461	Potato	cytosol	50.0	67.53
CDX73510	Canola	plastid	53.63	60.69
KRH75791	Soybean	nucleus	54.01	60.6
KRH65986	Soybean	nucleus	50.38	60.0
Solyc09g011850.2.1	Tomato	nucleus	54.58	59.83
AT3G54090.1	Thale cress	plastid	53.05	59.02
GSMUA_Achr10P...	Banana	plastid	59.16	58.71
VIT_08s0007g01640.t01	Wine grape	cytosol	50.76	36.94
EES04029	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.71	36.84
KXG24253	Sorghum	cytosol	21.18	33.23
EER93838	Sorghum	mitochondrion	34.92	31.39
EER88127	Sorghum	plastid	22.9	30.93

Protein Annotations

MapMan:15.6.1.2.2.6	Gene3D:3.40.1190.20	EntrezGene:8060103	UniProt:C5XPU7	ncoils:Coil	ProteinID:EES01764.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009295	GO:GO:0009507	GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043
GO:GO:0042644	GO:GO:0042793	GO:GO:0043621	InterPro:IPR029056	ProteinID:KXG33707.1	ProteinID:KXG33708.1
ProteinID:OQU87870.1	EnsemblPlants:OQU87871	ProteinID:OQU87871	ProteinID:OQU87871.1	PFAM:PF00294	PANTHER:PTHR43085
PANTHER:PTHR43085:SF10	InterPro:PfkB_dom	InterPro:Ribokinase-like	EnsemblPlantsGene:SORBI_3003G358000	SUPFAM:SSF53613	UniParc:UPI0001A84679
RefSeq:XP_002456644.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:67595293..67601799

Molecular Weight (calculated)

58948.7 Da

IEP (calculated)

6.395

GRAVY (calculated)

-0.556

Length

524 amino acids

Sequence
(BLAST)

001: MAMAVPAFLL PSLFPKPTLL AASLHSSLPR GLPLRCSPNG AAVPESPEPA PRRGRKKLPS PSAPKAKATR RRTKKADQDP DPEGAEEPAK RTSRRTRKSK
101: EEANQDEVAQ ASSHGTEETI PEANEEEDAV ELGGGYDDDE DFANEWPPLV CCFGAPRWEF VPTVRVSDRQ MHPDMYSTWR HLQWEPPEFA RAPGSAASNV
201: AIALTRLGGR AAVLGKVGDD DFGRELVYRM NCERVQTRAI KFDGKAATAA ARMKVTLRDR EDGKGGTKLV AETVKSAAED SLRKTEINVD VLKEARMFHF
301: SSEVLLNPSM HDTLFRAIEL SKKFGSKVFF DLNLPLPLWT SRDKTKEVIN RAWKEADIIE VSRDELEFLL DHEYYEYKRN TPPQYYLEGF HFTRNWPQYY
401: HYSPEEIAPI WHDGIKILLV TYGTLRIHYY TPKFHGCVVG TEDALITPYT TDRTGSGDAI VAAAIRKLTT CPEMYEDQDT LERQLRFAVA AGIISQWTIG
501: AVRGFPTESA AQNLKEEVYV PSMW

Best Arabidopsis Sequence Match ( AT3G54090.1 )
(BLAST)

001: MASLLIFPHL HHFDSSLDRR EVLVVRHSQA SRRFLTPKAS INGSGITNGA AAETTSKPSR KGRKKKQTST VIEKDNTETD PELNPELADY DDGIEFPYDD
101: PPLVCCFGAV QKEFVPVVRV HDNPMHPDMY SQWKMLQWDP PEFGRAPGGP PSNVAISHVR LGGRAAFMGK VGEDDFGDEL VLMMNQERVQ TRAVKFDENS
201: KTACTRVKIK FKDGKMMAET VKEPPEDSLF ASELNLAVLK EARIFHFNSE VLTSPTMQST LFTAIQWSKK FGGLIFFDLN LPLPLWRSRN ETRKLIKKAW
301: NEANIIEVSQ QELEFLLDED YYERRRNYTP QYFAEDFDQT KNRRDYYHYT PEEIKSLWHD KLKLLVVTDG TLRLHYYTPT FDGVVIGTED VLITPFTCDR
401: TGSGDAVVAG IMRKLTTCPE MFEDQDVMER QLRFAVAAGI IAQWTIGAVR GFPTESATQN LKEQVYVPSM W

Arabidopsis Description

FLN1Fructokinase-like 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M394]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.