Factsheet for VIT_08s0007g01640.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78206	Canola	cytosol	40.97	78.04
PGSC0003DMT400052461	Potato	cytosol	41.81	77.58
Bra007044.1-P	Field mustard	cytosol	40.69	77.51
CDX73510	Canola	plastid	43.61	67.82
Solyc09g011850.2.1	Tomato	nucleus	44.44	66.95
AT3G54090.1	Thale cress	plastid	43.06	65.82
KRH65986	Soybean	nucleus	39.03	63.86
KRH75791	Soybean	nucleus	41.25	63.6
GSMUA_Achr10P...	Banana	plastid	42.92	58.52
Os01t0851000-01	Rice	plastid	38.06	51.6
TraesCS3B01G397500.1	Wheat	plastid	37.5	51.53
TraesCS3A01G365700.1	Wheat	plastid	37.22	51.34
OQU87871	Sorghum	plastid	36.94	50.76
TraesCS3D01G358800.1	Wheat	plastid	37.08	50.76
Zm00001d042847_P001	Maize	plastid	36.53	50.48
VIT_18s0089g01230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	15.56	34.15
VIT_01s0011g00240.t01	Wine grape	mitochondrion, plastid	26.11	33.27
VIT_05s0102g00710.t01	Wine grape	cytosol, extracellular, plasma membrane	15.14	33.03
VIT_15s0048g01260.t01	Wine grape	cytosol	16.67	32.34
VIT_16s0022g02340.t01	Wine grape	cytosol	15.0	31.21
VIT_14s0006g01410.t01	Wine grape	plastid	16.11	30.21

Protein Annotations

EntrezGene:100259720	wikigene:100259720	EntrezGene:100853041	wikigene:100853041	MapMan:15.6.1.2.2.6	Gene3D:3.20.80.10
Gene3D:3.40.1190.20	EMBL:AM448175	ProteinID:CAN82905	ProteinID:CAN82905.1	ProteinID:CCB55522	ProteinID:CCB55522.1
InterPro:Carboh/pur_kinase_PfkB_CS	UniProt:F6HKY0	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016773	InterPro:IPR011256	InterPro:IPR029056	EntrezGene:LOC100259720	wikigene:LOC100259720	EntrezGene:LOC100853041
wikigene:LOC100853041	PFAM:PF00294	PFAM:PF04832	ScanProsite:PS00583	PANTHER:PTHR43085	PANTHER:PTHR43085:SF10
InterPro:PfkB_dom	InterPro:Reg_factor_effector_dom_sf	InterPro:Ribokinase-like	InterPro:SOUL_haem-bd	SUPFAM:SSF53613	SUPFAM:SSF55136
TIGR:TC68261	UniParc:UPI0002108E0A	ArrayExpress:VIT_08s0007g01640	EnsemblPlantsGene:VIT_08s0007g01640	EnsemblPlants:VIT_08s0007g01640.t01	RefSeq:XP_002273576
RefSeq:XP_002273576.2	RefSeq:XP_003632661	RefSeq:XP_003632661.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:+:15722213..15729564

Molecular Weight (calculated)

81365.3 Da

IEP (calculated)

7.546

GRAVY (calculated)

-0.432

Length

720 amino acids

Sequence
(BLAST)

001: MGMVFGKICV ETPKFQVIQS SADYEIRKYP PTVIAEVTYD PSQFRGDKDG GFTLLANYIG ALGNPQNTKP EKIEMTAPVV TKYAEKIAMT APVVTKSGEG
101: GEGKTVTMQF LLPSKYTKAE EAPRPVDERV VIREEGERKY GVVKFGGVAT EKVVGAKVES LEKSLERDGF KLIGEFVLAR YNPPWTLPAF RTNEVMIPIE
201: LVSPILFSLF SVKVSYYVPL SFCTLMQKAD SFDAHQCLCC RTHTSEKYIQ TMAAFHLLPP PQRSYQILFN PIKLTCLSST FHLQKPQNPK PLRAAISTQD
301: GALDTTKPTR RGRQKGTTTS SSSQTTRPKR SPKKNQTEAE VEITKQEPAE HSDDNNDEID FPYDDPPLIC CFGAAQKEFV PTVRVSEHQM HPDIYSEWKM
401: LQWDPPEFVR APGGPPSNVA ISHVRLGGRA AFMGKVGRDE FGEELVLTMN KEKVQTRAVK FDSNARTGCS YMRIKFENGK MMMETVKESP EDSLLSSELN
501: IAVLKEARIF HFNSEVLTSP SMHSSLFGAI ELSKKHGGLV FFDLNLPLPL WRSRDETRKL IEKAWNQADI IEMRRNYRPQ YYSDSYEQTK NRRDYYHYTR
601: DEISPLWHEG LKFLFVTDGT LRVHYYSPSF DGVVVGTEDV LITPFTCDRT GSGDAIVAGI MRKLTTFPEM YENQDTLERQ LRFAIAAGII SQWTIGGVRG
701: FPTESAAQNL KEQVYVPSMW

Best Arabidopsis Sequence Match ( AT3G54090.1 )
(BLAST)

001: MASLLIFPHL HHFDSSLDRR EVLVVRHSQA SRRFLTPKAS INGSGITNGA AAETTSKPSR KGRKKKQTST VIEKDNTETD PELNPELADY DDGIEFPYDD
101: PPLVCCFGAV QKEFVPVVRV HDNPMHPDMY SQWKMLQWDP PEFGRAPGGP PSNVAISHVR LGGRAAFMGK VGEDDFGDEL VLMMNQERVQ TRAVKFDENS
201: KTACTRVKIK FKDGKMMAET VKEPPEDSLF ASELNLAVLK EARIFHFNSE VLTSPTMQST LFTAIQWSKK FGGLIFFDLN LPLPLWRSRN ETRKLIKKAW
301: NEANIIEVSQ QELEFLLDED YYERRRNYTP QYFAEDFDQT KNRRDYYHYT PEEIKSLWHD KLKLLVVTDG TLRLHYYTPT FDGVVIGTED VLITPFTCDR
401: TGSGDAVVAG IMRKLTTCPE MFEDQDVMER QLRFAVAAGI IAQWTIGAVR GFPTESATQN LKEQVYVPSM W

Arabidopsis Description

FLN1Fructokinase-like 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M394]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.