Factsheet for Zm00001d042847_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87871	Sorghum	plastid	93.09	92.56
Os01t0851000-01	Rice	plastid	82.92	81.36
TraesCS3A01G365700.1	Wheat	plastid	79.27	79.12
TraesCS3D01G358800.1	Wheat	plastid	79.85	79.09
TraesCS3B01G397500.1	Wheat	plastid	78.69	78.24
CDX78206	Canola	cytosol	50.67	69.84
Bra007044.1-P	Field mustard	cytosol	50.48	69.58
PGSC0003DMT400052461	Potato	cytosol	50.67	68.04
CDX73510	Canola	plastid	54.51	61.34
KRH75791	Soybean	nucleus	54.13	60.39
Solyc09g011850.2.1	Tomato	nucleus	55.09	60.04
KRH65986	Soybean	nucleus	50.67	60.0
AT3G54090.1	Thale cress	plastid	53.55	59.24
GSMUA_Achr10P...	Banana	plastid	59.31	58.52
Zm00001d042536_P001	Maize	cytosol	19.96	36.62
VIT_08s0007g01640.t01	Wine grape	cytosol	50.48	36.53
Zm00001d012173_P001	Maize	plasma membrane	22.07	35.6
Zm00001d035038_P002	Maize	cytosol	20.54	31.94
Zm00001d035037_P008	Maize	cytosol	20.54	31.66
Zm00001d044813_P001	Maize	plastid	22.46	30.15
Zm00001d033181_P001	Maize	plastid	34.93	27.53

Protein Annotations

MapMan:15.6.1.2.2.6	Gene3D:3.40.1190.20	UniProt:A0A1D6N726	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009295
GO:GO:0009507	GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0042644	GO:GO:0042793	GO:GO:0043621	InterPro:IPR029056
ProteinID:ONM36391.1	PFAM:PF00294	PANTHER:PTHR43085	PANTHER:PTHR43085:SF10	InterPro:PfkB_dom	InterPro:Ribokinase-like
SUPFAM:SSF53613	UniParc:UPI0002207FA4	EnsemblPlantsGene:Zm00001d042847	EnsemblPlants:Zm00001d042847_P001	EnsemblPlants:Zm00001d042847_T001	SEG:seg

Description

Protein kinase

Coordinates

chr3:-:181900541..181905600

Molecular Weight (calculated)

58938.6 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.585

Length

521 amino acids

Sequence
(BLAST)

001: MAMAAPAFLL PSLFPKPTLL AASLHSSFPR GLSLRCSPNG AAVPEFPEPA SRRGRKKSPS PSAPKPRATR RRTKKADRDP DSEGEEEPVK RTNRRTRKSK
101: GEAKQEEVAQ AANHGTGDTI QKANEEEDAV EVGSDDDDFA NEWPPLVCCF GAPRWEFVPT VRVSDRQMHP DMYSTWRHLQ WEPPEFARAP GSAASNVAIA
201: LTRLGGRAAV LGKVGDDDFG RELVYRMNCE RVQTRAIKFD DKAVTATARM KVSFRDREDG KGGTKLVAET VKSAAEDSLR RTEINVDVLK EARMFHFNSE
301: VLLNPSMHDT LFRAIELSKK FGSKVFFDLN LPLPLWTSKD KTKEVINRAW KEAEIIEVSR DELEFLLDHE YYEYKRNTPP QYYLEGFHFT RNWPQYYHYS
401: PEEIAPIWHD GIKILLVTYG TLRIHYYTPK FHGCVVGTED ALITPYTTDR TGSGDAIVAA AIRKLTTCPE MYEDQDTLER QLRFAVAAGI ISQWTIGAVR
501: GFPTESATQN LKEEVYVPSM W

Best Arabidopsis Sequence Match ( AT3G54090.1 )
(BLAST)

001: MASLLIFPHL HHFDSSLDRR EVLVVRHSQA SRRFLTPKAS INGSGITNGA AAETTSKPSR KGRKKKQTST VIEKDNTETD PELNPELADY DDGIEFPYDD
101: PPLVCCFGAV QKEFVPVVRV HDNPMHPDMY SQWKMLQWDP PEFGRAPGGP PSNVAISHVR LGGRAAFMGK VGEDDFGDEL VLMMNQERVQ TRAVKFDENS
201: KTACTRVKIK FKDGKMMAET VKEPPEDSLF ASELNLAVLK EARIFHFNSE VLTSPTMQST LFTAIQWSKK FGGLIFFDLN LPLPLWRSRN ETRKLIKKAW
301: NEANIIEVSQ QELEFLLDED YYERRRNYTP QYFAEDFDQT KNRRDYYHYT PEEIKSLWHD KLKLLVVTDG TLRLHYYTPT FDGVVIGTED VLITPFTCDR
401: TGSGDAVVAG IMRKLTTCPE MFEDQDVMER QLRFAVAAGI IAQWTIGAVR GFPTESATQN LKEQVYVPSM W

Arabidopsis Description

FLN1Fructokinase-like 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M394]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.